Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01902 ATGATTCTGCAATCTAGAAGGTTCCAAACACGTTATAAGGAAGAAGCCAATTCTAATGTCCACATTCACGTGTTAATTGGAGCGAACCAAACCCTCACAGTACAACCAGTAGACGTAAAGCAGCAAATGGCCACTCCTTCAGAATCTCTACCGCTCCAAGACAGAGTCGCAATCGTCACCGGCTCGTCCCGCGGAATCGGCCGAGAAATCGCGCTTCACCTCGCCTCACTCGGCGCGCGAATCGTCGTCAACTACACTTCCAACTCGGCCCCAGCCGACTCACTTGTAGCTCAAATCAACGCCAACTCCGCCGCGCCGCGCGCCGTTTCAGTTCAAGCCGACGTGTCCGATCCGGATCAGGTCAAGTCGCTCTTCGACTCCGCCGAACGCGCCTTTGACTCTCCGATCCACGTCCTGGTCAACTCGGCGGGCGTAATCGACGGCACGTATCCTTCCATCGCCAACACCAGCGTGGAGTCCTTCGACCGCATGTTCGCGGTGAACACGCGCGGCGCGTTCGCGTGCGCGAGGGAGGCGGCGAACCGTTTGAAGCGCGGCGGCGGAGGGCGGATAATTCTGCTGACGTCGTCGCAGGTGGCAGCGCTGAGGCCAGGGTTCGGCGCGTACTCGGCGTCGAAGGCGGCGGTGGAGACAATGGTGAAGGTGCTGGCGAAGGAGCTGAAGGGAACGCAGATAACGGCGAATTGCGTGGCGCCGGGACCTATCGCTACAGATATGTTCTTCGAAGGGAGGACGGAGGAGACGGTGAATAGGATCGTGCAGGAGTGTCCGTTGGGTAGACTTGGTGAGACCAAAGATGTGGCACCTGTTGTGGGATTCCTGGCCACTGATGCTTCTGAGTGGGTCAACGGTCAAACCCTTCGTGTCAATGGTGGTTATGTTTAG 906 0.5806 MILQSRRFQTRYKEEANSNVHIHVLIGANQTLTVQPVDVKQQMATPSESLPLQDRVAIVTGSSRGIGREIALHLASLGARIVVNYTSNSAPADSLVAQINANSAAPRAVSVQADVSDPDQVKSLFDSAERAFDSPIHVLVNSAGVIDGTYPSIANTSVESFDRMFAVNTRGAFACAREAANRLKRGGGGRIILLTSSQVAALRPGFGAYSASKAAVETMVKVLAKELKGTQITANCVAPGPIATDMFFEGRTEETVNRIVQECPLGRLGETKDVAPVVGFLATDASEWVNGQTLRVNGGYV 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01902 301 FunFam Short-chain dehydrogenase reductase 43 301 - -
Pste5g01902 301 SMART This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 55 245 - -
Pste5g01902 301 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 53 300 IPR036291 -
Pste5g01902 301 CDD THN_reductase-like_SDR_c 52 301 - -
Pste5g01902 301 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 196 224 IPR020904 GO:0016491
Pste5g01902 301 PRINTS Glucose/ribitol dehydrogenase family signature 134 145 IPR002347 -
Pste5g01902 301 PRINTS Glucose/ribitol dehydrogenase family signature 209 228 IPR002347 -
Pste5g01902 301 PRINTS Glucose/ribitol dehydrogenase family signature 183 199 IPR002347 -
Pste5g01902 301 PRINTS Glucose/ribitol dehydrogenase family signature 230 247 IPR002347 -
Pste5g01902 301 PRINTS Glucose/ribitol dehydrogenase family signature 56 73 IPR002347 -
Pste5g01902 301 PRINTS Glucose/ribitol dehydrogenase family signature 264 284 IPR002347 -
Pste5g01902 301 PANTHER NADPH-DEPENDENT ALDEHYDE REDUCTASE-LIKE PROTEIN, CHLOROPLASTIC-RELATED 44 299 - -
Pste5g01902 301 Gene3D - 9 300 - -
Pste5g01902 301 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 145 IPR002347 -
Pste5g01902 301 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 189 197 IPR002347 -
Pste5g01902 301 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 209 228 IPR002347 -
Pste5g01902 301 Pfam Enoyl-(Acyl carrier protein) reductase 61 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01902 Pste-Chr5 12002970 12003875 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01902 25 299 Acyl Lipid Metabolism Gene Families AT1G24360 31.769 5.83e-32 119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01902 5 12002970 12003875 Pste5g01902 5 12002970 12003875 ECH