Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01900 AAAAAATCATCGGAAACAGAAAGCCCCGCCTCACCAACCAACAACGGTCACTGTGACGAGCCGCTCGTTTTGTTAAAACTTCTTTCCCTTATTTAAAAATGCGCCTATACGACAGCGTTTCGATTCTTTCTTCTCCATTGCATCTGAACAGGCAAAATTTCTTCTGAGACTCGCAATCGGAAACCCTAACCCTCATCAATTACGATAATCATTCCCCTATAATGGCAATTGCACGCACTGGAGTCTACGTCGATGACTATTTGGAATACGCGAGCACATTACCCGCTGAACTTCAGAGACTTCTTAACACTGTCCGAGAACTCGATGAACGATCCCAATCTATGATAAACCAGACCAGGCAGCAGACGAAGTACTGTATGGGGTTCTCATCACATGGGTCCAAGAAGGGTAATCACAGTTATAATAACAATTATGGGAATGAGGATGATGATGCCGCCATTGAGAAAATGCGAAAAGAAATTGAGGCAAATCAGGATAGTGCATTGAGTCTATGTACCGAGAAAGTTTTGCTGGCACGACAAGCATATGACCTGATTGATAGCCATGTAAAACGACTTGATGAGGATTTAAACAACTTTGCTGAAGATTTAAAGCAAGTTCACTTAGCTCCATTGTGGTGTTCTGCTAATGATCTTTTTACTGGGGTTGTCTTTGAGGGTAAAATACCCCCAGATGAACCAGCAATTCTTCCTCCATTGCCTATAGTCCCAAAAGCTGAAAAGCGCAAGCCCATATATATAACTCCTCAATCAAAGAGACTTGATTACAGGGATAGAGATTGGGATAGGGAGCGTGATAGAGACTTTGAGCTAATGCCTCCACCAGGAAGTCATAAGAAGGAGTACGCTACTCCAATGGATGTTGATCAACCCATTGATCCAAATGAACCTACATACTGTGTTTGTCATCAGGTATCCTTTGGAGATATGATTGCCTGTGACAACGAAAATTGCCAAGGAGGTGAATGGTTCCACTATTCGTGTGTTGGGCTAACGCAGGAGACAAGATTCAAAGGAAAGTGGTATTGTCCGACTTGCATATTGCTCCCACAATGTCAACGATGAATTTTGCAGGAATTGAACTACATTCTTAAATGACGACTGTTTCAATAGATTTGTCACTTTTTAGTGAATACAAAATGTGGGTTGTCAATATTCGTTTCTATATATTGCTTGGCCATTTGTGTTAGCC 1212 0.4175 MAIARTGVYVDDYLEYASTLPAELQRLLNTVRELDERSQSMINQTRQQTKYCMGFSSHGSKKGNHSYNNNYGNEDDDAAIEKMRKEIEANQDSALSLCTEKVLLARQAYDLIDSHVKRLDEDLNNFAEDLKQVHLAPLWCSANDLFTGVVFEGKIPPDEPAILPPLPIVPKAEKRKPIYITPQSKRLDYRDRDWDRERDRDFELMPPPGSHKKEYATPMDVDQPIDPNEPTYCVCHQVSFGDMIACDNENCQGGEWFHYSCVGLTQETRFKGKWYCPTCILLPQCQR 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01900 287 ProSiteProfiles Zinc finger PHD-type profile. 230 282 IPR019787 -
Pste5g01900 287 PANTHER INHIBITOR OF GROWTH PROTEIN 2 280 IPR028651 -
Pste5g01900 287 Pfam Inhibitor of growth proteins N-terminal histone-binding 9 126 IPR024610 -
Pste5g01900 287 SMART PHD_3 232 280 IPR001965 -
Pste5g01900 287 SMART ING_2 9 126 IPR024610 -
Pste5g01900 287 Gene3D - 5 124 - -
Pste5g01900 287 Coils Coil 24 44 - -
Pste5g01900 287 SUPERFAMILY FYVE/PHD zinc finger 207 280 IPR011011 -
Pste5g01900 287 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 224 281 IPR013083 -
Pste5g01900 287 FunFam PHD finger protein ING 224 282 - -
Pste5g01900 287 CDD PHD_ING 232 279 - -
Pste5g01900 287 CDD ING_plant 17 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01900 Pste-Chr5 11974248 11979611 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01900 5 11974248 11979611 Pste5g01900 5 11974248 11979611 ECH