Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01898 CGACGCAACACAAACAGTAACCTTAACTTGTTGTCGTTTTCCTTCTGTCTCTGTTTTTTACTTTGTGTTTCTTTGTCGCGTGCTTCAAATTCTGCCAAGGACCAACGAGTTTGTGTTTGCTTTGCTTTCTGCTTTTGCTTTTGGTTGTGTTGCTGGTGATGGAAATGGAAGCTGCTGACGTTGTCGAAACGACGACGAATCCATCCGAACGGGGTTCCGAGAAGAAGAAGAGTTTGAGAACGGAGATTGATACTTCAGCGCCATTTGAATCAGTGAAAGAAGCTGTCACAATGTTCGGGGGTGGTTACTGGAAGCCCCTTCACAGTAACATTACTTGTGTTGCTTCTGATTCTGAGCACCACACAGAAGAACTTGGTGCTGAAAAACTGCAGGAGCAGGCTGCGGTATTGGAGAAAGAACTGATCTTGAAGGAAAGGGAAACACTTAATGTGTTGAAAGAATTGGAAAGTACCAAAAGGCTTGTTGAAGATTTGAAATCAAAGATACACAAGGAAGAGTCTGAAGCAAATTTGAATCTTCAGATGAGCCAATGTGATAAAAAATCAGTTTTTGAGGAGAATGAAGAAAAGGAAAACCAAGTGAGTCAATTGAATGTTCTTCTACCTTCCATGAAAGGATCTATCCCCTGCCCTTCATCTACTCCTGGCTTAATACTAATGGAATTAAAGCAGGCCAAATTGAATTTAACTAGAACTACTAATAACCTTGCAGATGTTCGAACTTCTGTTGAATCGCTTAATAAGAAATTAGAAAAGGAAAGAATCTCACTTGAGAAAACACGTGATAGGTTAGCTCAAAATACTTCAAAAATATCTTCTCTTGAGGAAGAGCTAAACCAGACAAGATTAAGGCTGCAAATAGCAAAAGATGCTCAAATTAAAGGTGCTTCCGATGATCCTTCAGATATTACAAGAGAGCTCCAGCGATTGAGTTCTGAGGCAGAGAATTTCAAAAGAATGGGAGAATCTGCAAAATCAGAAGTTTTGAAAACAATGTCTGAGATTGAACAGACAAAAATGATGATAAGAACAGCTGAAATCAGATTGGTTGCAGCCAGAAAAATGAAAGAAGCTGCTAGAGCTGCCGAAGCTTTTGCCCTTGCAGAAATCAATGCTTTATCTAATCACGAGATTTCACCGGAAAATCAGGTTACTCTTTCATATGAAGAGTATACTGCTCTGACGTCCAGAGCTCAAGATGCGGAGGAACAATCTAAGAAGAGAGCTGCTAGTGCTATGCTTGAAGTTGATGAAGCAAATTTGTCAAACACGGACATTTTGAAAAAGATAGAAGAAGCTACAGAAGAAGTAATAACCAGCAAGAAGGCCCTTGAAGAAGCTATAGAAAGGGTAGAAGCTGCAAATAGAGACAAGGTAGCAGTTGAAGAGGCTTTAAGGAATTGGCGGTCTGAGGGTCAAAAAAGACGTTCTTCTATACACAACTCTACCAAATTCAAAAACTCTTGTCCATCCCATCATCAGAGAGATCCTCGATTACTCGATGTGAACGGATTGTATCTGGTAAATGATGAAGCCAGACCAGTTCTAAAGCCAACCCTATCAATAGGACAGATACTTAGCAGGAAGCTGCTTCAACCACAGGAGTTTGAAGCCGGAGAAAGAATCTTGGTGAACCAGAATGTGTCAGTGTCACTGGGTCAGATGCTTGGCAAACAGAACAATGATCCCGCTGTTGATAGACAAGTTGAGAAACAAACTGTTCATAAGCTGTTCTCTACTAAGAGAAAGAAATTTGGATTTGCACGAATCTCGCATATTTTGTCAAAACAGAAGAAAAAGAAGCCAACCCTGAATTTGAGGTGATAGATTATTGAAACTGTTTGCTCAATCTAGCAGTGACAAAAGCTAGACTCTAGTTGTATCTTCTATCAGTCCTTATCTTATTGTGCTTGCCTGAATAGAATCTTGTTTTTATCAAACAGTATTTAACCATTTATTTAAGTTGCAGTCCATGCTTGTAAAATGTATATTAACTTCCTAGGTATGCACTTCCATTTGCTTCCCGTTGCTCTGTTGTAGAGATGATTCATATGAATTCTTAGCCTCATGTGTGATGGTATCATAATTTTCATCTGCCTAATGTC 2125 0.3953 MEMEAADVVETTTNPSERGSEKKKSLRTEIDTSAPFESVKEAVTMFGGGYWKPLHSNITCVASDSEHHTEELGAEKLQEQAAVLEKELILKERETLNVLKELESTKRLVEDLKSKIHKEESEANLNLQMSQCDKKSVFEENEEKENQVSQLNVLLPSMKGSIPCPSSTPGLILMELKQAKLNLTRTTNNLADVRTSVESLNKKLEKERISLEKTRDRLAQNTSKISSLEEELNQTRLRLQIAKDAQIKGASDDPSDITRELQRLSSEAENFKRMGESAKSEVLKTMSEIEQTKMMIRTAEIRLVAARKMKEAARAAEAFALAEINALSNHEISPENQVTLSYEEYTALTSRAQDAEEQSKKRAASAMLEVDEANLSNTDILKKIEEATEEVITSKKALEEAIERVEAANRDKVAVEEALRNWRSEGQKRRSSIHNSTKFKNSCPSHHQRDPRLLDVNGLYLVNDEARPVLKPTLSIGQILSRKLLQPQEFEAGERILVNQNVSVSLGQMLGKQNNDPAVDRQVEKQTVHKLFSTKRKKFGFARISHILSKQKKKKPTLNLR 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01898 561 Coils Coil 370 425 - -
Pste5g01898 561 MobiDBLite consensus disorder prediction 426 448 - -
Pste5g01898 561 Pfam Weak chloroplast movement under blue light 174 429 IPR008545 -
Pste5g01898 561 Pfam Weak chloroplast movement under blue light 28 131 IPR008545 -
Pste5g01898 561 Coils Coil 74 94 - -
Pste5g01898 561 Coils Coil 261 281 - -
Pste5g01898 561 Coils Coil 102 122 - -
Pste5g01898 561 MobiDBLite consensus disorder prediction 16 30 - -
Pste5g01898 561 Coils Coil 183 245 - -
Pste5g01898 561 MobiDBLite consensus disorder prediction 1 30 - -
Pste5g01898 561 Gene3D - 172 337 - -
Pste5g01898 561 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 29 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01898 Pste-Chr5 11966302 11969676 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01898 5 11966302 11969676 Pste5g01898 5 11966302 11969676 ECH
Pste5g01898 5 11966302 11969676 Pste6g00334 6 1108343 1111344 PCT