Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01810 ATGGCTTCTTCTGCAGCTCGTGTGGCCATATTTGCCATTTCCATGGTTTTGCTTTCCTCAGTTGCTGTGGCAACTGATTTCACTGTGGGTGAACAAAGTGGTTGGACTCTTGATTTTAACTACGCAGAGTGGGCACAGGGCAAAGTTTTCCGTGTTGGTGACAACCTTGTGTTCAATTACGACAATTCTAAGCACAATGTTGTGAAAGTGGATGGGACACAATTCCAGAACTGCAGTTTCACATCAGATAACACTGTGTTTTCGAGTGGAAAGGATAGCATTCCACTGAAAGCCGAAGGGAAGAAATGGTACGTTTGTGGCATAGCTAACCACTGTTCTGCTCATCAAATGAAGCTTGTCATCAACGTTGAGGCTGCAGGTCCTGCACCTGCTCCTTCTTCCTCTGCTCATTCTCTTTTCTCATCTCTATCAGCATTTGGGGTCCTCATTGTTGCCTTTGCAGCCATCTTTGCCTGA 477 0.457 MASSAARVAIFAISMVLLSSVAVATDFTVGEQSGWTLDFNYAEWAQGKVFRVGDNLVFNYDNSKHNVVKVDGTQFQNCSFTSDNTVFSSGKDSIPLKAEGKKWYVCGIANHCSAHQMKLVINVEAAGPAPAPSSSAHSLFSSLSAFGVLIVAFAAIFA 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01810 158 Gene3D - 23 127 IPR008972 -
Pste5g01810 158 Pfam Plastocyanin-like domain 35 114 IPR003245 GO:0009055
Pste5g01810 158 SUPERFAMILY Cupredoxins 24 123 IPR008972 -
Pste5g01810 158 ProSiteProfiles Phytocyanin domain profile. 25 125 IPR003245 GO:0009055
Pste5g01810 158 PANTHER BLUE COPPER PROTEIN 22 131 IPR039391 GO:0009055
Pste5g01810 158 CDD Phytocyanin 25 123 - -
Pste5g01810 158 FunFam Cupredoxin superfamily protein 23 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01810 Pste-Chr5 11442197 11442978 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01810 1 123 Miscellaneous Gene Families AT2G32300 39.837 2.43e-28 104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01810 5 11442197 11442978 Pste5g01810 5 11442197 11442978 ECH