Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01790 GGAGTACGCATTATTTCTGTGATTCTTCTTTTGACGCTTACTAAAAAGGTAACTTCAAATGCACTTGGTGGTACTATGAAGGATGAGGAAGCACTCAAGGAAAGCCAAAATGAAATGGAAAATTCTATCTCAATGCATGGTGAAATGGGGTTCATGGAAGATGATGATTGGCAGATGGTGCAAAAGAGAGGAAACCAATTTGTGGTGAATGACAAACCTTTCTATGTAAATGGATTCAACACATACTGGTTGATGGTATTTGCAGCAGATGATTCCACCAGAGGAAAGGTCACTGAGGTGTTCCAACAAGCTTCCTCAGTGGGCATGACAGTTTGTAGAACTTGGGCCTTCAATGATGGCCAGTGGCGGGCCCTACAGAAATCCCCATCAGTTTATGATGAACAAGCCCTGGACTTTGTGGTTAGTGAAGCAAAGAAATACAAAATCAGGCTTATATTATCATTGACCAACAACTGGGAGGCATATGGAGGCAAAGCACAATATGTGAAATGGGGCAATGCTGCTGGCCTTAACTTGACCTCTGACGATGACTTCTTCTCACATCCTACTCTTAGAAGCTACTACAAGGCTCATACTGTGCTCAATAGAGTTAACACATTCACGAACATCACTTACAAGGAAGATCCGACAATTTTTGCTTGGGAATTGATGAATGAGCCTCGATGCACTTCGGATCCCACAGGTGACAAGTTACAGGATTGGATACAAGAAATGGCATTCCATGTGAAGAAAATTGATCCAAAACACTTGGTGGAGGTTGGACTAGAAGGATTTTATGGCCCATCAACACCTCAAAGAACTCAGTTCAATCCCAATTCATATGCTACACAGGTTGGAACTGATTTTATCAGGAACCACCTGGTTCTTGGTGTGGACTTCGCTTCTGTTCATATATATGCTGACTCTTGGATTTCACAACAAATTGCTGATACTCATCTCCCATTTGTAAAATCATGGATGGAAGCCCACATAGAGGATGCTGAAAAATATCTTGGAATGCCAGTTGTTTTTGGTGAGTTTGGTGTATCTTCCAAAGACCCTGGCTACAATTCATCATATAGAGACACACTTATAAGCACTGTGTACAATACCATTCTAAACTCCACAAAGAAAGGAGGGAGTGGGGCTGGAAGCCTTTTGTGGCAATTTTTTCCTGATGGAACCGATAACATGGATGATGGGTATGCAATTGTTCTCTCAAAATCTCCTTCTACCTCAAAGATTATACAACTTCAGTCCTCAAGGCTTACACTGTTCAATTCCTTGTGCAACACCAAATGCAGTTGGGGTTGTAAGAAGAAAAAAATGTTAGAGGAAATACTATATCATGACGAACTGTAATGCCATATGTGGAAAGTTTTCAATTGTAATGCAATGGTCATATAAAACCATGCATCGATAAATACCTGATTCACCATATAGCATTTTATTTGTATTAATGTCAACAATGTGTTTAATTTGTATGTTGTGACATTATGGTCATGCAAGGTCAGCAGAGCACCATCTTAAACTCGAATCATTCTAC 1546 0.403 GVRIISVILLLTLTKKVTSNALGGTMKDEEALKESQNEMENSISMHGEMGFMEDDDWQMVQKRGNQFVVNDKPFYVNGFNTYWLMVFAADDSTRGKVTEVFQQASSVGMTVCRTWAFNDGQWRALQKSPSVYDEQALDFVVSEAKKYKIRLILSLTNNWEAYGGKAQYVKWGNAAGLNLTSDDDFFSHPTLRSYYKAHTVLNRVNTFTNITYKEDPTIFAWELMNEPRCTSDPTGDKLQDWIQEMAFHVKKIDPKHLVEVGLEGFYGPSTPQRTQFNPNSYATQVGTDFIRNHLVLGVDFASVHIYADSWISQQIADTHLPFVKSWMEAHIEDAEKYLGMPVVFGEFGVSSKDPGYNSSYRDTLISTVYNTILNSTKKGGSGAGSLLWQFFPDGTDNMDDGYAIVLSKSPSTSKIIQLQSSRLTLFNSLCNTKCSWGCKKKKMLEEILYHDEL 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01790 453 Gene3D Glycosidases 57 426 - -
Pste5g01790 453 FunFam Mannan endo-1,4-beta-mannosidase 6 56 427 - -
Pste5g01790 453 SUPERFAMILY (Trans)glycosidases 60 412 IPR017853 -
Pste5g01790 453 Pfam Cellulase (glycosyl hydrolase family 5) 70 366 IPR001547 GO:0004553|GO:0071704
Pste5g01790 453 PANTHER - 15 443 IPR045053 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01790 Pste-Chr5 11328999 11331896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01790 54 453 Glycoside Hydrolase AT5G01930 72.236 0.0 644
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01790 5 11328999 11331896 Pste5g01790 5 11328999 11331896 ECH
Pste5g01790 5 11328999 11331896 Pste7g00046 7 383903 386554 PCT