Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01759 GTGGGAGTGGTCTTCTATAAATAATAAATTCTAGCTCTGTAGCGTATCCACTTTGACAGGATTAGGGTTAAGGCAGAGACACCAATCCCTTAACGAGAACTTGAAGAAATCAACAAATCAGCGATGCCTCGCTACGACGATAAGTATGGCAACACCCGCCTCTATGTTGGACGCTTGTCTTCAAAGACTCGTTCCCGTGACCTGGAGCGTGTCTTCAGCAGATATGGAAGCGAGCTTTTATGTGTCTATTAGGATGAATGGATTTATTCCTCCTCGATTTATCCACGTTGTTTACATTTGCAAGGGAGCTAAGTTAGTGATAAGTTGCCTTGAGGTGTCCACCATGTTCTATGCTCAAACTTGGGGGATGAAATACAGGTTTTCCCCAGGCCATGTTTTGAGCTTGGTTTTTATTGGTTATTTGTCATGTTATGCGTGGGAGCCAAATCCCATTGGTGTTTCTGAGGTTTTCTCTAAACCTGGAGGTCTGTGTTGGGAGGTTGGCCTTGGTGGAATTGATGGAAATTCCTGTCGAGTGTTGACTTTGGCGATTCTTTCTGTAATGTTATTACGTGTTTTTTATGGAAATGGCAACAATCACAAACTGGTGTTTAGTTCGTCTTTGAGGGGCGATTTAAGTAATGATGGCCTTACTGTTTATGGAAACCATTTCCGCAGAATTCGAGGTGTTGATATGAAGAATGATTTCGCCTTTGTTGAATTTAGTGATCCTCGAGATGCTGATGATGCAAGATATAACTTGGATGGACGTGATGTTGAAGGAAGTCGTATTATTGTGGAATTTGCCAAAGGGGGTCCTCGTGGTTCCCGGGAATACTTGGGCCGGGGCCCTCCTCCTGGATCTGGACGATGCTTTAACTGTGGCATTGATGGTCATTGGGCCCGAGATTGCAAAGCTGGGGATTGGAAGAATAAGTGTTATCGTTGTGGGGAAAGAGGTCATATAGAAAAGAATTGCAAGAACAGTCCCAAAAAGTTGAGCAGCAGACGTGGAAGGAGTCTTTCACGTTCGCCAGTCAGGTCACGCTCTCCACGTCGTGACAGAAGCAGGGATCGGAGCTACAGCCGAGACCGCAGCTACAGCCGATCTAGATCTCCTGTAAGGAGAGAACGAAGCCCAGTTTCTGAAGATAGATCTCAGAGTCCTCAGCCCTCCAAGATAAGGAAGCATAGTGCATCACCTGACCAAAGCAGTCCACAGAAGAGAGATGACACATCTCCTGGAAATGATAGGTTGGTCTCTAGGCAAGATGGGTCTGACTATAGTGATGGTCCCAGAGGAAAAAGTAGAAGCCCTGCTAGGGACCATGATGAGGGTGGCTATGATAGCCCTAAAGTTAACGGGCGTAGCCGCAGCCCCAGTCCTGGTCAGAGCCCTAGGGATGATGACAGGAGCCCCATTGATGAAGATGATGATAACCACCGCCGCTCACAGTCGCCTTAAAAATTTTTGTTAAAGTGAGGTCAGAATGTGGCCCAGTTTGTGCTGCTTTGTTTATAAAAAGCATTGCAGCCTAAATCTGTGACAATTATTTATGAAAACGGTTTTATGTACGCTATTTTTCAGATTATTGCTGGCCAAGCAACATGTGTGGCTTGCCTAGAATATTTTGTGCGTGGATTTGTTTAGTGTTGGCATAATTTAAACATATGAATTATTGTGAGAAATTTAAATTTCTGATGTTTTGAATCTTTTAACGCGA 1724 0.4461 MATPASMLDACLQRLVPVTWSVSSADMEASFYVSIRMNGFIPPRFIHVVYICKGAKLVISCLEVSTMFYAQTWGMKYRFSPGHVLSLVFIGYLSCYAWEPNPIGVSEVFSKPGGLCWEVGLGGIDGNSCRVLTLAILSVMLLRVFYGNGNNHKLVFSSSLRGDLSNDGLTVYGNHFRRIRGVDMKNDFAFVEFSDPRDADDARYNLDGRDVEGSRIIVEFAKGGPRGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCKNSPKKLSSRRGRSLSRSPVRSRSPRRDRSRDRSYSRDRSYSRSRSPVRRERSPVSEDRSQSPQPSKIRKHSASPDQSSPQKRDDTSPGNDRLVSRQDGSDYSDGPRGKSRSPARDHDEGGYDSPKVNGRSRSPSPGQSPRDDDRSPIDEDDDNHRRSQSP 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01759 439 MobiDBLite consensus disorder prediction 299 335 - -
Pste5g01759 439 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 153 223 IPR000504 GO:0003723
Pste5g01759 439 Gene3D - 148 231 IPR012677 -
Pste5g01759 439 Gene3D - 233 261 - -
Pste5g01759 439 Gene3D - 262 309 - -
Pste5g01759 439 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 178 216 IPR000504 GO:0003723
Pste5g01759 439 MobiDBLite consensus disorder prediction 276 439 - -
Pste5g01759 439 SMART rrm1_1 154 219 IPR000504 GO:0003723
Pste5g01759 439 SUPERFAMILY RNA-binding domain, RBD 166 242 IPR035979 GO:0003676
Pste5g01759 439 SMART c2hcfinal6 264 280 IPR001878 GO:0003676|GO:0008270
Pste5g01759 439 SMART c2hcfinal6 242 258 IPR001878 GO:0003676|GO:0008270
Pste5g01759 439 MobiDBLite consensus disorder prediction 336 362 - -
Pste5g01759 439 Pfam Zinc knuckle 263 280 IPR001878 GO:0003676|GO:0008270
Pste5g01759 439 Pfam Zinc knuckle 242 257 IPR001878 GO:0003676|GO:0008270
Pste5g01759 439 ProSiteProfiles Zinc finger CCHC-type profile. 264 280 IPR001878 GO:0003676|GO:0008270
Pste5g01759 439 ProSiteProfiles Zinc finger CCHC-type profile. 242 257 IPR001878 GO:0003676|GO:0008270
Pste5g01759 439 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 176 339 - -
Pste5g01759 439 MobiDBLite consensus disorder prediction 380 403 - -
Pste5g01759 439 FunFam serine/arginine-rich splicing factor RS2Z32-like isoform X1 233 261 - -
Pste5g01759 439 MobiDBLite consensus disorder prediction 415 439 - -
Pste5g01759 439 SUPERFAMILY Retrovirus zinc finger-like domains 233 281 IPR036875 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01759 Pste-Chr5 11184419 11187845 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01759 5 11184419 11187845 Pste5g01759 5 11184419 11187845 ECH