Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01725 TTTGCCAATTGTGGCCAAAGTCGCCCCAAAAGTGGTCTAAAGGTGTATAGTATAAAGAAGGAAGGTGCAGGAGAAATTAATGGAGAAACAAACCAACTTCATCTTTGTTCCTCCACAATCCATAACCCTAATTCACAGAGGAAGAAGAAGATGCTAACATGTCCTAGCACCTCTCTCTATAGCCTCGCCACTCTGCAACGCCGTTCTCAACCATCTCACTCTCATTTCCTCTTCTCCAACCCTCTCCTCTTCCCTCGCTTTGCCGCTTCCCGCAAATGCAACTTCCGTTCGCTCCTCTCCGCAAAAAACTGTCGACGCTCCGCTGTCAGAGCTTCCGCGGACTCTCCGGAGGTGTCGGAGTCCGTCGTCGCCGGCGACGGTGGGGTCCTGCAACCGTATTCCGTCAAGATTCCCGTTGGTGATAGACATATTTTGGTTGAGACTGGTCATATAGGAAGACAAGCAAGTGGCTCTGTTACAGTTACAGATGGAGAGACTATTGTGTACACTACTGTTTGCTTGGATGATGTTCCTAGTGAACCATCTGATTTTTTCCCTCTTTCTGTTAATTATCAAGAGCGATTTTCAGCTGCTGGTCGCACTAGTGGAGGTTTCTTCAAGCGAGAAGGAAAGACAAAAGATCATGAGGTTCTTATCTGTAGATTGATTGACAGGCCTCTACGTCCCACGATGCCAAAGGGCTTCTATCATGAAACTCAAATATTATCTTGGGTTTTGAGCTATGATGGATTGCACTCCCCTGATTCTTTGGCAGTCACTGCAGCTGGTATAGCAGTTGCACTTTCAGAATTGCCAACATCAAAAGCAGTTGCCGGAGTTCGGGTTGGTCTTGTTGGTGATAAGTATATAATTAATCCTACAACTGAGGAGATGGAGCACTCTGAGTTGGACCTCTTGCTGGCTGGCACAGACAGTGCAATATTGATGATAGAGGGCTATAGCAATTTTCTTTCGGAAGAGAAGTTACTTAAAGCTATAGAAGTTGGTCAGGATGCAGTGCGGGCAATATGTAATGAGGTAGAAGCTTTGGTTAAGAAGTGTGGGAAGCCAAAGATGTTGGATGCCATCAAGTTGCCTCCTCCTGAACTCTATGAACATGTTGAAGAAATTGCTGGTGATGAGTTAGTAAAGGTTCTTCAAATTAAAAACAAAATACCCAGAAGGAAAGCCCTTTCATCATTAGAAGAAAAGGTTCTGAAGATACTCACAGAAAACGGGTTTGTCTCAAATGACTCAACACTGAGGAGTAATTCTGAGACCATAGCGGAGATTCTTGAAGATGAAGATGAAGATGAGGAAGTAATTGTTGACGGTGAAGTTGATGAAGGTGACATTCATATAAAGCCAACTCCACGCAAACCAGCCCTTTTATTTTCTGAGGTGGATGTGAAGTTGGTATTTAAGGAAGTTACATCAAAATTTTGGAGGAAGCGCATAGTAGAGGGTGGGAAAAGGAGTGATGGGCGAACACCTGTTGAAATACGTCCAATCAATTCGAGGTGTGGCCTATTACCTAGAGCACATGGAAGTACACTGTTTACAAGAGGAGAGACACAGGCACTGGCAGTTGTTACACTTGGAGATAAACAAATGGCACAAAGAATAGACAATCTTGATGGTGTTGATGAATTCAAGAGGTTCTATCTGCAGTATTCATTTCCTCCTTCATGTGTTGGGGAAGCTGGCCGAATTGGTGCCCCAAGTAGAAGAGAAATTGGTCACGGGATGCTTGCTGAGAGATCCCTTGAACGAATTTTGCCTTTTGAAGATGATTTCCCTTACACTATACGTGTTGAGAGTACTATCACAGAAAGCAATGGCTCTTCAAGCATGGCTTCTGTTTGTGGAGGTTGCTTAGCTTTGCAAGATGCTGGGGTTCCTGTTAAGTGTTCTATTGCTGGAATTGCAATGGGTATGGTGCTGGATACCAAGGAATTTGGTGGAGATGGAACTCCGCTTATACTGTCTGACATAACTGGATCTGAAGATGCATCTGGAGATATGGATTTCAAGGTTGCTGGAAATGAAGATGGCATAACTGCATTTCAAATGGACATTAAGGTGGGTGGAATTACTTTGCCCATCATGAGAAAGGCACTCCTACAAGCAAGAGATGGCAGGAAGCATATACTTGGAGCAATGATGAATTCCTCACCTCCCCCAGCAAAAAGGCTTTCCAAGTATGCTCCTCTGATTCATGTTATGAAGGTAAAACCTGAAAGAATACATCTTATAATTGGTTCTGGTGGAAAAAAAGTGAAGAGCATTATTGAGGAATCTGGAGTAGAGGCTATTGATACTGAAGATAATGGAATTGTGAAAATATTTGCAAAAGATTTGCCTAGTTTAGAGAAGTCTAAAGCTATTATTAATAGTTTGACGATGGTTCCAACTATTGGTGATATATATAGGAACTGTGAAATCAAATCAATAGCCCCCTATGGAGTTTTTGTAGAGATAGCACCTGGACGAGAGGGACTTTGTCATATCAGTGAACTGAGTTCAGGTTGGCTACCAAAGGCAGAAGATGCTTTCAAAGTTGGAGATCGCATTGATGTAAAGCTTATAGAGAAAAATGAAAAGGGACAGCTGCGCCTTAGTCACCGAGCCCTGCTTCCAGATCCAGATCCAGACAACTCAAATGTCAGCAAGCTCACTGAAGATACAGAAACTTCACCAAAATCACCTGATAAGGATATATCAAAAAAGGTTTCCAGCTTGCCAAAAGACGGTTTAGTGGAAGAAAAGACAGAACAGTCTAAGGATAGCATTCCTAAAGTCACAGTCTCTTCTAAAAGGAGTTCAGAGGATGATTCTGTACTTCCTTCTAAGAAGTTTGTAAGGAGATTGGTCAACTCTTCCCAGGATAAGCCTTTCACTAACAAAGACAAGACAAAGAACAGTAGCAACAAAGCAGTTGGTAGTGTGTCTGGCAAAGATGAAAGCAGTTTGGTTAGTGGAGAGTTTAATGCTTCTCGGATGTTTGTGATGATGAATACA 3021 0.428 FANCGQSRPKSGLKVYSIKKEGAGEINGETNQLHLCSSTIHNPNSQRKKKMLTCPSTSLYSLATLQRRSQPSHSHFLFSNPLLFPRFAASRKCNFRSLLSAKNCRRSAVRASADSPEVSESVVAGDGGVLQPYSVKIPVGDRHILVETGHIGRQASGSVTVTDGETIVYTTVCLDDVPSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGKTKDHEVLICRLIDRPLRPTMPKGFYHETQILSWVLSYDGLHSPDSLAVTAAGIAVALSELPTSKAVAGVRVGLVGDKYIINPTTEEMEHSELDLLLAGTDSAILMIEGYSNFLSEEKLLKAIEVGQDAVRAICNEVEALVKKCGKPKMLDAIKLPPPELYEHVEEIAGDELVKVLQIKNKIPRRKALSSLEEKVLKILTENGFVSNDSTLRSNSETIAEILEDEDEDEEVIVDGEVDEGDIHIKPTPRKPALLFSEVDVKLVFKEVTSKFWRKRIVEGGKRSDGRTPVEIRPINSRCGLLPRAHGSTLFTRGETQALAVVTLGDKQMAQRIDNLDGVDEFKRFYLQYSFPPSCVGEAGRIGAPSRREIGHGMLAERSLERILPFEDDFPYTIRVESTITESNGSSSMASVCGGCLALQDAGVPVKCSIAGIAMGMVLDTKEFGGDGTPLILSDITGSEDASGDMDFKVAGNEDGITAFQMDIKVGGITLPIMRKALLQARDGRKHILGAMMNSSPPPAKRLSKYAPLIHVMKVKPERIHLIIGSGGKKVKSIIEESGVEAIDTEDNGIVKIFAKDLPSLEKSKAIINSLTMVPTIGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSGWLPKAEDAFKVGDRIDVKLIEKNEKGQLRLSHRALLPDPDPDNSNVSKLTEDTETSPKSPDKDISKKVSSLPKDGLVEEKTEQSKDSIPKVTVSSKRSSEDDSVLPSKKFVRRLVNSSQDKPFTNKDKTKNSSNKAVGSVSGKDESSLVSGEFNASRMFVMMNT 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01725 1007 ProSiteProfiles Type-1 KH domain profile. 737 797 - -
Pste5g01725 1007 PANTHER POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE 109 931 IPR012162 GO:0003723|GO:0004654|GO:0006402
Pste5g01725 1007 Gene3D - 807 878 IPR012340 -
Pste5g01725 1007 Pfam 3' exoribonuclease family, domain 2 276 338 IPR015847 -
Pste5g01725 1007 CDD RNase_PH_PNPase_2 500 728 - -
Pste5g01725 1007 CDD RNase_PH_PNPase_1 133 359 - -
Pste5g01725 1007 Hamap Polyribonucleotide nucleotidyltransferase [pnp]. 131 879 IPR012162 GO:0003723|GO:0004654|GO:0006402
Pste5g01725 1007 FunFam Polyribonucleotide nucleotidyltransferase 734 803 - -
Pste5g01725 1007 SUPERFAMILY Ribonuclease PH domain 2-like 275 359 IPR036345 -
Pste5g01725 1007 FunFam Polyribonucleotide nucleotidyltransferase 438 733 - -
Pste5g01725 1007 CDD S1_PNPase 807 875 - -
Pste5g01725 1007 CDD KH-I_PNPase 735 804 - -
Pste5g01725 1007 Pfam 3' exoribonuclease family, domain 1 500 634 IPR001247 -
Pste5g01725 1007 Pfam 3' exoribonuclease family, domain 1 142 272 IPR001247 -
Pste5g01725 1007 Gene3D - 121 357 IPR027408 -
Pste5g01725 1007 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 732 801 IPR036612 GO:0003723
Pste5g01725 1007 MobiDBLite consensus disorder prediction 873 991 - -
Pste5g01725 1007 MobiDBLite consensus disorder prediction 972 991 - -
Pste5g01725 1007 SUPERFAMILY Ribosomal protein S5 domain 2-like 133 272 IPR020568 -
Pste5g01725 1007 Gene3D K Homology domain, type 1 734 806 IPR036612 GO:0003723
Pste5g01725 1007 SUPERFAMILY Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 367 497 IPR036456 GO:0003723|GO:0006396
Pste5g01725 1007 SMART S1_6 805 876 IPR022967 -
Pste5g01725 1007 SUPERFAMILY Ribonuclease PH domain 2-like 628 731 IPR036345 -
Pste5g01725 1007 Pfam S1 RNA binding domain 814 876 IPR003029 GO:0003676
Pste5g01725 1007 ProSiteProfiles S1 domain profile. 807 876 IPR003029 GO:0003676
Pste5g01725 1007 SUPERFAMILY Ribosomal protein S5 domain 2-like 474 646 IPR020568 -
Pste5g01725 1007 SUPERFAMILY Nucleic acid-binding proteins 800 881 IPR012340 -
Pste5g01725 1007 FunFam Polyribonucleotide nucleotidyltransferase 1, chloroplastic 807 878 - -
Pste5g01725 1007 SMART kh_6 736 801 IPR004087 GO:0003676
Pste5g01725 1007 MobiDBLite consensus disorder prediction 897 929 - -
Pste5g01725 1007 Gene3D - 438 733 IPR027408 -
Pste5g01725 1007 FunFam Polyribonucleotide nucleotidyltransferase 131 361 - -
Pste5g01725 1007 NCBIfam polyribonucleotide nucleotidyltransferase 467 877 IPR012162 GO:0003723|GO:0004654|GO:0006402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01725 Pste-Chr5 10955434 11002672 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01725 5 10955434 11002672 Pste5g01725 5 10955434 11002672 ECH