Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01713 ATGCAACGGAGAAAGGTATCAGATACGGGGACTCGTTGCAGTTGGAAAGGAGGTTGGTGTTGTTGGCAACGTTTTGGAATTGCACACGAGGAAGGTGACATCACTTGGCGACAGTACGAGGTGGTAGTTGCTGATTTGCAAGAGTGGCATAGCTTGGAAGCCATGGTTGTTATTTCTTGTTATGTGTTTGATTTTCTTGAAGGCCATGCCCAACAAGCCAACAGGGCATCAGAGAATTTACCCAAATTCACTGTGCTTTAATTCTCCAAACCATTACATCTTCTCATCCATCATCATCAAGACATGAAAAGCATAGACATCTTGTGTGCATCACAGGCCTCAACAGCCATATGTCTTAGCATGGATAGACCCTCTTCCTCAACCTCTGCTTCCATTACCAACACTCCTCAATTTGGTGGCAGAGCAATTGACCGCCACAACCCCATCATCACTGATCCAAGAAGAACCCCCTCCAGAGATCTCATTGCCCCTAGTTCTTCCTCTCACTCTCCCATTGACCTCAAACCTTTACATGATCTTCCAATTCCAAAGGCCAAGAAAAACCCCACTTCCAAGTCAAGTGGCCAGAAAAAGAAAAATACTACAAAGGGTCATGATCAGAAGAAGAAAAGTGCTGCTGGAAAGTTGACTGAACACATCGCCAACAATTACTCTTCAAAACCAATTGATAGTATTCTGAAGAGGAGTTGGGTTAGGCCACCTACTGATTTAATCACTCCTCCTGGTTCTTCAAGATATTTGCTCGGTGACACGCCTTCCTTGGATGATGTTTATGATCCTGTTTTGGCTTTAACTAATGTTGATAAGGAGAAAACTCAGGTTCTTCATCATGATCAAACCAACCATTCATCTAAACCCTCCAGCTCCTCTTTTTCAAAAACTGATTCCTCAGACCAGGTTGTAGTATTGAGGGTTTCTCTGCACTGCAAAGGTTGTGAAGGGAAGGTGAGGAAACATCTATCACGAATGCGAGGAGTTTCGTCCTTCAACATAGACTTTGCAGCAAAGAAGGTTACAGTTGTAGGTAATGTGACTCCTTTGAGTGTATTAGCAAGCATATCAAAGGTGAAGAATGCACAATTTTGGCCACAACCTGCTTCAGTAGTTGGATCCGGTACCCCCAGATACAAAGAGAACAAATTTCATCTAACTGGAGAGAGAAATTTCATCTAATTAATAGTGTACTCATGTACTTTTTTTTTCTGTCACAACTCCAAGGTCTTCGAAGGAACCTTTTATATAAGGTTTAAACTTTGTTTTGTTGTGTCATTTATCTAATGACACAATTACAAGTCAGTAACCTGGTACATCAGATTAATGGGCCAAATTAGAGGTGTATAATTTCATATTAGCAACCGTTGTGTATTATTCATTAACTTCTTTTTTCCTAGACTGGTAAACTGTGACTTGCTTATTAAAGTTGTCATCCATTTTCATATTTATATGTTTTGCAGCTATCCTGCCACACTATGATACTAGGTACTTCATATATGCAGGTTATTAAGAATCGTCATTTTCATAAACGGAAGTTCTGTAAATTATAGAAAAGGAATTTAGCACTTTCGTAGATCATAGTAGCATCAATGTGAAATGAATGAAACAAT 1625 0.4006 MKSIDILCASQASTAICLSMDRPSSSTSASITNTPQFGGRAIDRHNPIITDPRRTPSRDLIAPSSSSHSPIDLKPLHDLPIPKAKKNPTSKSSGQKKKNTTKGHDQKKKSAAGKLTEHIANNYSSKPIDSILKRSWVRPPTDLITPPGSSRYLLGDTPSLDDVYDPVLALTNVDKEKTQVLHHDQTNHSSKPSSSSFSKTDSSDQVVVLRVSLHCKGCEGKVRKHLSRMRGVSSFNIDFAAKKVTVVGNVTPLSVLASISKVKNAQFWPQPASVVGSGTPRYKENKFHLTGERNFI 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01713 296 Pfam Heavy-metal-associated domain 209 261 IPR006121 GO:0046872
Pste5g01713 296 ProSiteProfiles Heavy-metal-associated domain profile. 204 270 IPR006121 GO:0046872
Pste5g01713 296 MobiDBLite consensus disorder prediction 21 117 - -
Pste5g01713 296 Gene3D - 202 266 - -
Pste5g01713 296 CDD HMA 208 261 IPR006121 GO:0046872
Pste5g01713 296 MobiDBLite consensus disorder prediction 21 39 - -
Pste5g01713 296 PANTHER OS08G0405700 PROTEIN 6 273 IPR044526 -
Pste5g01713 296 MobiDBLite consensus disorder prediction 185 201 - -
Pste5g01713 296 MobiDBLite consensus disorder prediction 178 201 - -
Pste5g01713 296 SUPERFAMILY HMA, heavy metal-associated domain 205 262 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01713 Pste-Chr5 10852027 10861603 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01713 5 10852027 10861603 Pste4g02391 4 17039072 17040277 PCT