Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01656 AAGAAGTTAAAAAAAAAAAGAAAAAAAAAGAAGGTGTGATGTGGAGAAACATTTATGCAAAGAAGGAGAAGTGGAGAGGAAATGAAGAATGGGTGGCGTGGCACCAAGGTTGCTGGTACTCCTGGGCAGTCCCTTACCTCTTGTACGGCGTCGCTACCACCGTAAACTCTTCCTTCCCTCATCCCATTCACTCCGCCACTTTTCCACTTCCTCTCATTCCCTTCACCTCTTCCACCACTCCAACTCAACGCCTCCCAATCCCAATCCCAATCCCAATCCCAATCCCAATCCCAACACACCACTCCCTGGCCCGAGTGGTCCTCATTCCTCTCCCACATCTCCTCCGCCGGCTACCTCCCCTCTCCCCCCGACCCCTCCTTCACCGCCGCCGCCCAACACCTCTCCCACTCCTTCCTCCGCGACGCCTCCGCCTGCTTAGCCTTCGCCCGCCACCGTCCCAACCTTCTCTGCTTGCTTTCTGCCAGAGACATCTCCGCCCTCGCACACCACCTTCCCTTCCTCTTCCACGACGCCGATTCCCTCCGAAGGATCAACTCCTTTCTCTCCTCTCCCATACCGTCGTGGATGCTGATAGAGCAACTACAGTTGATCTGATGAAGTTTTTGCTGAGTTATGCAAGTAACTCATTTGTCTCTTCAGAAGGGAACATTCTCAATAAAAGAGATAGTGTTGAATCCTCTGTTAGAAATCTATTTCGTGAGCTTTTCAAGCTGACTTATAATGCACCTGGACCTAACTCTTTTGATTCACTGCAAACTCAAGTGGCTTGCGGATTCGGACCAACAAACCCTCCTGAACCAAAAATTGAAATGAAGAGGGGTGATTGGATTTGCCCGAGGTGTAATTTCATGAATTTTGCAAGAAACATCAAATGTCTCGAGTGTGAGGAAGCAAGGCCAAAAACAACTGGCTGGAGGAGGAATATGACTTGCTTGAGGTGTGATTGTAAGCGACCTGGACAAATCTCTCTGGGATCCACCAATACCATTTCCAATATGGGGTATGAAAATGGAAGCAATCCTAATACTTCAGATATTGATGCCAGATTAGCTGCTAATGAAGAAAAAGCACAGCGTTGGTTTAGCAAGGTTTCTCAGCTAGATAGCAGTGCCGATATTAACAGTGTGATAGCGGACGAAGATTTTCCTGAAATAATGCCATTGAGGAAAGGAGTGAATAGATTTGTTGTGAGCACAAGAAAGACCCCACTAGAGAGGAGATTGGCTAATGCTCAATACAAGAGGAACTTGTCCAATAATGACATTCTTGGGATTGAGGATTCTAAAGCTGGGGAGCCAATCAAGTCCCATCACAATCTGGATGACATGCAAAGTCATTCAGCTGGCCTTCCTCAATTTAACAATAAGAACATTTTGCCGAACAAAATGCCAATGGAGACAGGCAACCTTCATTTGCTTGCAGTACTTCATATTTCAAAAATGAGAAAGGAACTACACTGGTGCTGTTCCTCCCATTCCCTTGTCTGCAGAGACACTTGCCCAAAACTCGCTAGCAGAGGAGAGCAAAAGGTGGTCATTGACACTGGTGATGGGAGATATCCAAGTTTGGAAGACAGCTCTCCACTTTCTAATAATTCTACGAGCCAAAATATGACAGGGGAGAAGGAGAAAGAGCAAGCTGAAAAATCTGAGAGGTGGTTTAGAAAGGTTTCTGAGCTGAATGATTTTCCAGATATAACAAGTGCAATATCCGATGAGGATTTCCCTGAAATAATGCCCATGCGTAAAGGAGAAAATCGATTTGTTGTCAGCAAGAAAAAGGATCGTTCTTTGACAACACCAGCATACAAGAGACGCGTGGCCATGGAGCAATCTGGCAAAACCAACTTTGTCCCTTTTGTCCCTTTCCCCCCAGATTACTTTGCCAAAAAGGACAAGCAGCAGGCAGATGGAACAGATTCAAAAGTGGATGATAGAGTAGATTCGATGGATAGGTCCAATGGTGATCCATATGCTATATCTGAGGTGGTGGAGAAGCCTCCAGAGATGTCAGATGATGCTAGAGCTCAACCTGAACAGAGCTCAAATAACAATGATGTTGGTTCTATGTACGGGACAACAACCAGTGGAAATTCAAGTCAGGGTTTCAATCAAGCTCATGTTCCAAATTTGACAGGGAGTTCATCCCCAGACCCGGCATCTGAAATCCAGAATGTTAGAGTAGCGTGGACAGGGAAGAGTTTGGAGGGGTCAGCTGTGAAGGAACCGGATCCTCTGGACATGTCAGAGGAGGCAAAAGCACAGAGGTGGTTCCGTAGGGTTGCACAGATTAAGGATATTTCTGAGCTCAGTCAAATTCCAGATGAAGATTTTCCTTCAATAATGCCTATGCGCAAAGGAGTCAACAGATTTGTTGTAAGCAAGAGGAAAACGCCATTGGAAAGGAGATTGACATCTCAACAGTATCGAAGAAATCTTCCAACTGTGAGCTCAGATCCAATTAAAAAAGAAAATGATGGCAGC 2504 0.4585 MWRNIYAKKEKWRGNEEWVAWHQGCWYSWAVPYLLYGVATTVNSSFPHPIHSATFPLPLIPFTSSTTPTQRLPIPIPIPIPIPIPTHHSLARVVLIPLPHLLRRLPPLSPRPLLHRRRPTPLPLLPPRRLRLLSLRPPPSQPSLLAFCQRHLRPRTPPSLPLPRRRFPPKDQLLSLLSHTVVDADRATTVDLMKFLLSYASNSFVSSEGNILNKRDSVESSVRNLFRELFKLTYNAPGPNSFDSLQTQVACGFGPTNPPEPKIEMKRGDWICPRCNFMNFARNIKCLECEEARPKTTGWRRNMTCLRCDCKRPGQISLGSTNTISNMGYENGSNPNTSDIDARLAANEEKAQRWFSKVSQLDSSADINSVIADEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYKRNLSNNDILGIEDSKAGEPIKSHHNLDDMQSHSAGLPQFNNKNILPNKMPMETGNLHLLAVLHISKMRKELHWCCSSHSLVCRDTCPKLASRGEQKVVIDTGDGRYPSLEDSSPLSNNSTSQNMTGEKEKEQAEKSERWFRKVSELNDFPDITSAISDEDFPEIMPMRKGENRFVVSKKKDRSLTTPAYKRRVAMEQSGKTNFVPFVPFPPDYFAKKDKQQADGTDSKVDDRVDSMDRSNGDPYAISEVVEKPPEMSDDARAQPEQSSNNNDVGSMYGTTTSGNSSQGFNQAHVPNLTGSSSPDPASEIQNVRVAWTGKSLEGSAVKEPDPLDMSEEAKAQRWFRRVAQIKDISELSQIPDEDFPSIMPMRKGVNRFVVSKRKTPLERRLTSQQYRRNLPTVSSDPIKKENDGS 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01656 822 Gene3D - 259 297 - -
Pste5g01656 822 Pfam Zn-finger in Ran binding protein and others 267 294 IPR001876 -
Pste5g01656 822 ProSitePatterns Zinc finger RanBP2-type signature. 270 289 IPR001876 -
Pste5g01656 822 SUPERFAMILY Ran binding protein zinc finger-like 261 296 IPR036443 -
Pste5g01656 822 MobiDBLite consensus disorder prediction 622 714 - -
Pste5g01656 822 MobiDBLite consensus disorder prediction 669 714 - -
Pste5g01656 822 MobiDBLite consensus disorder prediction 799 816 - -
Pste5g01656 822 MobiDBLite consensus disorder prediction 624 646 - -
Pste5g01656 822 PANTHER ZINC FINGER PROTEIN 525 606 - -
Pste5g01656 822 SMART zf_4 268 292 IPR001876 -
Pste5g01656 822 MobiDBLite consensus disorder prediction 505 545 - -
Pste5g01656 822 MobiDBLite consensus disorder prediction 518 534 - -
Pste5g01656 822 MobiDBLite consensus disorder prediction 793 822 - -
Pste5g01656 822 ProSiteProfiles Zinc finger RanBP2 type profile. 266 295 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01656 Pste-Chr5 10496948 10500301 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01656 185 318 EF-hand Containing Proteins AT1G55040 37.654 7.12e-19 90.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01656 5 10496948 10500301 Pste5g01656 5 10496948 10500301 ECH