Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01631 ATGGAATCGAGCGTGTTGGACTGTCTGGGCGTGGAAATAATCGGTGTGATGAGTCCCGTCTCGATCTGCATGTTCCTGGTGGTCCTCCTCGTCTACTCCCTCTCCTCCCCTTCCGCCACCATCACCACCGCCGCCAACCTCGTCTACGCGGAGAACCCCTCCGACACGGCGGCGCAGAAGCTGGAGGGCGCCCTCCTCAACGCCCTCGTTTTCATCATCCTCATCGCCCTCGTCACCTTCCTCCTCGTCCTCCTCTACTACTACAACTGCACCGCCTTCCTCCGCCACTACACGCGCTTCTCCGCCTTCTTCGTCCTCGCCTCCATGGGCGGATCCATCCTCCTCTCCCTCCTCCAGCGCCTCTCCATCCCCCTCGACGCCGTCACCGCCTTTATTCTCCTCCTCAACTTCACCGTCGTCGGCGTCCTCTCCGTCTTCGCCGGCGCCATTCCCATTCTTCTCCGACAATGCTACATGGTCTGTCTCGGGATCATCGTCGCCGCCTGGTTCACCAAATTGCCCGAGTGGACCACCTGGACGCTCCTCGTCGCCCTCGCGCTCTACGACTTGGTCGCCGTTCTCGCTCCCGGCGGCCCGCTCAAGCTGCTCGTCGAATTGGCCTCCAGCCGGAACGAGGAGCTGCCGGCGTTGGTTTACGAGGCGCGTCCCACGGTTGCCCCTCGAAACGCCGTCGCGCTAGGGTTTCTTGTCGCGGGGGTTTCGGATTCCGAAGCTTCTAGAATCGAGCTTCAGGTAGTTTCTAGGGATAGTGTAGTCATTAATAATGATAATGCGGAGAATAGGAATAATAATGATGAAGGGGAAAGGTCTCCCTTGGTGGGTGGAATGAGATTTGGTGAGGTTGTTAATGAAGAGATGTCACCACTTGTTGAGATGAATGGAGTTGGGGATAATGAAGATGAAGGGGTTAGGAGGGAGATTGGTGATAGAGGGATTAAGCTTGGACTTGGGGACTTTGTTTTCTACAGTGTTCTTGTGGGGAGAGCTGCTATGTATGATTTGATGACTGTGTATGCGTGCTACCTTGCCATTATTTCAGGGCTCGGCTGCACTCTCATTTTGTTGTCTGTGTGCCGCCAGGCTCTGCCGGCACTTCCCATTTCCATCACCTTGGGTGTTCTCTTCTATTTTTTGACACGCTTGCTCATGGAGCCCTTCATTGTTGGGACTGCCTCCAATTTGATGATGTTTTGA 1215 0.5572 MESSVLDCLGVEIIGVMSPVSICMFLVVLLVYSLSSPSATITTAANLVYAENPSDTAAQKLEGALLNALVFIILIALVTFLLVLLYYYNCTAFLRHYTRFSAFFVLASMGGSILLSLLQRLSIPLDAVTAFILLLNFTVVGVLSVFAGAIPILLRQCYMVCLGIIVAAWFTKLPEWTTWTLLVALALYDLVAVLAPGGPLKLLVELASSRNEELPALVYEARPTVAPRNAVALGFLVAGVSDSEASRIELQVVSRDSVVINNDNAENRNNNDEGERSPLVGGMRFGEVVNEEMSPLVEMNGVGDNEDEGVRREIGDRGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCRQALPALPISITLGVLFYFLTRLLMEPFIVGTASNLMMF 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01631 404 PANTHER PRESENILIN 2 404 IPR001108 GO:0004190|GO:0016020|GO:0016485
Pste5g01631 404 PRINTS Presenilin family signature 172 179 IPR001108 GO:0004190|GO:0016020|GO:0016485
Pste5g01631 404 PRINTS Presenilin family signature 17 27 IPR001108 GO:0004190|GO:0016020|GO:0016485
Pste5g01631 404 PRINTS Presenilin family signature 189 206 IPR001108 GO:0004190|GO:0016020|GO:0016485
Pste5g01631 404 SMART psh_8 62 390 IPR006639 GO:0004190|GO:0016020
Pste5g01631 404 Gene3D Presenilin 300 395 IPR042524 -
Pste5g01631 404 Pfam Presenilin 11 267 IPR001108 GO:0004190|GO:0016020|GO:0016485
Pste5g01631 404 Pfam Presenilin 277 394 IPR001108 GO:0004190|GO:0016020|GO:0016485
Pste5g01631 404 FunFam Presenilin 297 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01631 Pste-Chr5 10373384 10374598 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01631 1 404 Miscellaneous Gene Families AT1G08700 63.797 0.0 527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01631 5 10373384 10374598 Pste5g01631 5 10373384 10374598 ECH