Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01617 TTCTTCTTCTCTTTAGTATTAAGAAAATAATTTATTTATTTTTTAATAACATGGCCCCATATTACTGACTTATTCAATCTCATTGTGCTTACATTTACATAGTGTACATGTGTATGTGTATATATATGTATATATCCATAGAGGTTTGGATCAGAACTGAGAAAGGAAAGATTTGAGGCTTACTTTGTTGCACATATATTTGTGGGCACTAAATTAGAGTGTTGAGAGGATGGTGGGTGTTATTTCTTTGGTAACAGGGAGGCCTGGTCCAAGTGGGTTTGGATCAGCTTCCACTGCTGAACAGGTTACTCAAGGAATTCATGCTAGTAACCTCACTGCAATTATCACAGGAGGAGCAAGTGGTATAGGGTTGGAGACAGCACGAGTGTTAGCTCTACGAAAGGTTCATGTGGTGATTGCAGTACGAAACATGGTGTCTGCAAAGGAAGCTAAGCAATACATACTTGAGGAGAATGAGTCTGCACGAGTGGACATAATGAAACTCGACCTATGCTCAGTGAATTCTGTTAGAACATTTGTGGACAACTTCTTAGCCCTCGATCTTCCTCTCAACATTTTAATAAACAATGCTGGAGTAATGTTCTGCCCCTTCAAGCTCTCTGAGGATGGCATTGAGATGCAGTTTGCAACAAACCATCTTGGCCATTTCCTCTTGACAAACCTACTTCTTGACAAAATGAAACAAACTGCAAAAGCCACTGGAATAGAGGGCAGGATCATAAATCTATCATCAATTGCCCATAACTACACTTACAGAAAGGGAATTAGATTTAATAAGATCAATGAACGAAGAGGTTATGGTAACAAAAAGGCCTATGGACAGTCCAAGTTAGCTAACATATTACATACAAATGAGCTTTCTCGCCGCCTGGAGGAAGAGGGTGTGAACATCACAGCCAACTCGGTCCACCCAGGAGTGATAATGACTCCTCTAATGAGACATTCTTCTTACCTTATGCGTATACTTCCTCAAGATCTTCACCTTTTACATATGGAAGAACGTTCCCCAGGGAGCAGCCACAACATGCTATGTTGCCCTCCACCCAAGCGTGAAAGGTGTAACTGGGAAGTACTTTGTGGATTGCAATCAATGCAAAACAAGTGCATATGCCAAAAACAAACAACTAGCAAAGAAACTCTGGGATTTCAGTATCGAGTTGATCAAATCAATTTCAAAAGCAGCTTAGGACACAAGCCTCGTTGTGGGCATCCGTTTATGAAAACTGGCAAGTTACAGTTATAGTTGCAATTTGTCGTTCTCTGAACATGTTTCCAAACTTTTATTTTCATCCTGTATCCATTAGCTAGTTGAGTCCCTATAATCAAATAAAATTATTCGCAATTTACTAGCTAACTTTATGCAATAATCTTTCTCGCTGTT 1402 0.3959 MVGVISLVTGRPGPSGFGSASTAEQVTQGIHASNLTAIITGGASGIGLETARVLALRKVHVVIAVRNMVSAKEAKQYILEENESARVDIMKLDLCSVNSVRTFVDNFLALDLPLNILINNAGVMFCPFKLSEDGIEMQFATNHLGHFLLTNLLLDKMKQTAKATGIEGRIINLSSIAHNYTYRKGIRFNKINERRGYGNKKAYGQSKLANILHTNELSRRLEEEGVNITANSVHPGVIMTPLMRHSSYLMRILPQDLHLLHMEERSPGSSHNMLCCPPPKRERCNWEVLCGLQSMQNKCICQKQTTSKETLGFQYRVDQINFKSSLGHKPRCGHPFMKTGKLQL 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01617 344 PRINTS Glucose/ribitol dehydrogenase family signature 226 243 IPR002347 -
Pste5g01617 344 PRINTS Glucose/ribitol dehydrogenase family signature 36 53 IPR002347 -
Pste5g01617 344 PRINTS Glucose/ribitol dehydrogenase family signature 112 123 IPR002347 -
Pste5g01617 344 PRINTS Glucose/ribitol dehydrogenase family signature 162 178 IPR002347 -
Pste5g01617 344 PRINTS Glucose/ribitol dehydrogenase family signature 203 222 IPR002347 -
Pste5g01617 344 CDD retinol-DH_like_SDR_c_like 36 249 - -
Pste5g01617 344 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 112 123 IPR002347 -
Pste5g01617 344 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 203 222 IPR002347 -
Pste5g01617 344 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 176 IPR002347 -
Pste5g01617 344 Gene3D - 28 303 - -
Pste5g01617 344 PANTHER RETINOL DEHYDROGENASE 14 259 - -
Pste5g01617 344 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 35 252 IPR036291 -
Pste5g01617 344 Pfam short chain dehydrogenase 36 182 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01617 Pste-Chr5 10329501 10335301 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01617 35 242 Miscellaneous Gene Families AT2G29340 28.169 5.81e-06 44.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01617 5 10329501 10335301 Pste5g01617 5 10329501 10335301 ECH