Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01521 ATGTGGAAGCTTGTGCGATTCGCGGCTCCGCGCTTCTACACGGCCATTCCCGGTCCCTGCAAGGTCCACAAACGCGGCACTGATATTCTCCACGATCCTTGGTTCAACAAGGATACTGGATTTCCTTTAAGTGAAAGGGATCGGTTGGGGCTTCGGGGCCTGCTTCCTCCTCGTGTCATTTCATTTGAGCATCAATACGATCGGTTTATGAATTCATATAGATCGTTGGAGAAGAATACATGCAGCCAATCAGATAAATTTGTTTCTTTATCCAAATGGAGGATCTTAAATAGATTGCATGACAGGAATGAGACTTTGTATTACAGAGTTCTTATTGATAACATCAAAGAATTTGCTCCAATAATCTATACTCCTACAGTTGGGTTGGTGTGTGAAAATTATTCAGGGTTATTTAGACGCCCGCGTGGAATGTATTTTAGTGCCAAAGATAAAGGAGAGATGAATTCAATGATCTATAACTGGCCATCTGATCAGGTAGACATGATTGTCTTGACAGATGGTAGTCGTATTCTTGGCTTGGGTGACCTTGGAGTTCAGGGCATTGGAATACCTATAGGAAAACTTGACATGTATGTTGCTGCTGCTGGTATAAACCCACGAAAAATACTTCCAGTTATGTTAGATGTTGGCACAAACAATCAAAAGCTACTTGAAGATCCCCTTTATTTAGGAGTTCGACAACCTAGGTTGGAAGGTGAAGAGTATCTGTCAATTGTGGATGAATTCATGGAAGCTGTACATGCTCGATGGCCTAAGGCTATTGTGCAGTTTGAGGATTTCCAAATGAAGTGGGCTTTTGAAACCCTGAAACGATATCGAGAAAGGTTTTGTATGTTTAATGATGATATACAGGGCACGGCTGGTGTAGCACTTGCTGGACTATTAGGAACTGTAAGATCCCAAGGTCGGCCATTGTCTGATTTTTTGAAACAAAAGATAGTTGTGGTTGGAGCTGGGAGTGCAGGGCTTGGCGTTCTTAACATGGCTGTCCAGGCTGTTTCAAGGATGTCAGGGGGCAGTCGAACAGCAGCCAACAGTCAATTTTTTTTAATTGATAAAGATGGTCTTGTCACAACAGAAAGGAGCAATCTAGATCCAGCTGCAGTTCCATTTGCCAAAAATCCAAGAGATCTTGAAGGGCTTTCAGAGGGTGCTAGTATAATCAAAGTGGTTAAGAAGGTTAAACCACATGTGCTCCTTGGATTGTCCGGAGTTGGTGGTGTTTTCAACGCAGAGGTGCTTAAGGCAATGAGAGAATCTGTTTCAACAAAACCTGCTATTTTTGCAATGTCTAATCCCACCATGAATGCTGAGTGCACTGCTATTGAAGCTTTCAGTCATGCTGGAGAAAATATAGTGTTTGCAAGTGGAAGCCCGTTTGAAAATGTCGATCTTGGAAATGGAGAAATTGGTCATGTAAATCAAGCCAACAACATGTACCTGTTCCCAGGGATTGGTTTGGGGACACTTCTATCAGGTGCTCCTCATATAACGGATGAAATGTTGCGAGCAGCAGCTGAGCGCCTTGCTTCATACATGACAGATGGGGATGTCCAAAAAGGAATCTTGTATCCATCCATTGATTGTATACGAAAGGTTACCGCAGAGGTTGGGGCTGCTGTTGTACGTGCAGCAGTTGCAGAAAAGCAGGCTGAAGGGCATGGTGATGTAGGGCTCAAAGAACTAGCGAACATGTCAAAAGAAGATACTGTGGAATATGTTAGAGGCAATATGTGGTACCCTGAGTATTGCCCCCTTGTACATGAAAAATGAACGTCTTTTGTTAAGTTCTGTTTAACAAATCTTAGTCCACCCTCCCTTTTCTTTTAGAAGCTTCATAACTATTGTTAAGTTCTGTTCCTTTGTTAACACGCATGCAGTTATACAAGCACAGATTGTTATATTATTATTTACGTAATAAATAATTCTTTCCCAAACTTGAATAAAATTCATTTGCAAGATATATAG 1989 0.4183 MWKLVRFAAPRFYTAIPGPCKVHKRGTDILHDPWFNKDTGFPLSERDRLGLRGLLPPRVISFEHQYDRFMNSYRSLEKNTCSQSDKFVSLSKWRILNRLHDRNETLYYRVLIDNIKEFAPIIYTPTVGLVCENYSGLFRRPRGMYFSAKDKGEMNSMIYNWPSDQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDMYVAAAGINPRKILPVMLDVGTNNQKLLEDPLYLGVRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLKRYRERFCMFNDDIQGTAGVALAGLLGTVRSQGRPLSDFLKQKIVVVGAGSAGLGVLNMAVQAVSRMSGGSRTAANSQFFLIDKDGLVTTERSNLDPAAVPFAKNPRDLEGLSEGASIIKVVKKVKPHVLLGLSGVGGVFNAEVLKAMRESVSTKPAIFAMSNPTMNAECTAIEAFSHAGENIVFASGSPFENVDLGNGEIGHVNQANNMYLFPGIGLGTLLSGAPHITDEMLRAAAERLASYMTDGDVQKGILYPSIDCIRKVTAEVGAAVVRAAVAEKQAEGHGDVGLKELANMSKEDTVEYVRGNMWYPEYCPLVHEK 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01521 597 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 290 594 IPR036291 -
Pste5g01521 597 FunFam Malic enzyme 288 597 - -
Pste5g01521 597 SMART malic_2 100 280 IPR012301 GO:0004471
Pste5g01521 597 Pfam Malic enzyme, NAD binding domain 290 552 IPR012302 GO:0051287
Pste5g01521 597 ProSitePatterns Malic enzymes signature. 286 302 IPR015884 GO:0004471
Pste5g01521 597 FunFam Malic enzyme 24 287 - -
Pste5g01521 597 SMART Malic_M_2 290 553 IPR012302 GO:0051287
Pste5g01521 597 PRINTS Malic enzyme signature 166 195 IPR001891 GO:0004470|GO:0004471
Pste5g01521 597 PRINTS Malic enzyme signature 202 224 IPR001891 GO:0004470|GO:0004471
Pste5g01521 597 PRINTS Malic enzyme signature 261 279 IPR001891 GO:0004470|GO:0004471
Pste5g01521 597 PRINTS Malic enzyme signature 429 445 IPR001891 GO:0004470|GO:0004471
Pste5g01521 597 PRINTS Malic enzyme signature 106 130 IPR001891 GO:0004470|GO:0004471
Pste5g01521 597 PRINTS Malic enzyme signature 320 336 IPR001891 GO:0004470|GO:0004471
Pste5g01521 597 PRINTS Malic enzyme signature 286 302 IPR001891 GO:0004470|GO:0004471
Pste5g01521 597 Pfam Malic enzyme, N-terminal domain 100 280 IPR012301 GO:0004471
Pste5g01521 597 PIRSF ME 11 596 IPR001891 GO:0004470|GO:0004471
Pste5g01521 597 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 10 289 IPR046346 -
Pste5g01521 597 PANTHER MALIC ENZYME-RELATED 19 590 - -
Pste5g01521 597 Gene3D - 288 597 - -
Pste5g01521 597 Gene3D - 24 287 IPR037062 GO:0004471
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01521 Pste-Chr5 9681570 9688565 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01521 5 9681570 9688565 Pste5g01521 5 9681570 9688565 ECH
Pste5g01521 5 9681570 9688565 Pste6g02186 6 10350279 10358622 PCT