Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01489 CTTTGTTCTCTGTGATAGCTTGATCAAATTCTTTAAGAATTTTTTTTATTAAAGTTTGAGTTGGACAGTTCTATCAAATTGTTGAAAAGTCTATGCTTTTTTTCTTTATTATTGTTATTATTTTATCCCCCACATTTCTGGGATTGTGGATAAGTCGTGGCTGCAACTATCTTGTAACTTAGAACTGTTACACCGAAAGGAAAAAGAAGAAGGGGAGAAAAGGATTGCAGATAGATTGAATGTTGTGAACAATGGGTTCATCCAAGGCCTCATGCAGTGTTTCTCTGCTCCTATTGTTCATAGTGGTTTGCTTTTCCTTCGAATGTTTGGCTACTAAAAAACATGCTGACCTGAGCACAACTCTAATAGTAAATGCTTCTGATGCGTCTTCAAGGCCAATACCGGAGACTCTTTTTGGCATATTCTTTGAGGAGATCAATCATGCTGGAGCTGGGGGATTGTGGGCTGAGCTTGTGAGCAACAGAGGATTTGAAGCCGGAGGCCCAAACACTCCTTCAAATATTGATCCTTGGTCAATTATTGGAAATGAATCATTGATTAATGTTGAAACTGATCGTACCTCTTGCTTTGATCGTAATAAGGTTGCACTTCGATTGGAGGTGTCATGTGACAGTAAAGGTGACAACGTCTGCCCAGCTGATGGTGTTGGTGTTTATAACCCTGGTTTCTGGGGCATGAATATCGAGCAAGGGAAAAAATACAAAGTGGTATTCTATGTTCGTACAACTGAATCACTTAATCTAACAGTTTCATTGACTGGATCAAATGGTGTGGGAAGCCTGGCTTCATCTGTGATCACGGGTTCTGCACTCAATTTTTCAAACTGGACAAAGGTGGAGACTTTATTGGTTGCCGAGGCAACCAACCATAACTCAAGACTTCAATTAACCACCACCAACAAAGGTGTGATATGGTTGGACCAAGTGTCTGCTATGCCACTGGACACATACAAGGGACATGGTTTCCGAACTGAACTTGTTGAAATGCTGGCAGCTTTGAAACCTAGATTTATCAGATTTCCAGGTGGTTGTTTTGTTGAAGGAGAGTGGTTAAGAAATGCATTTCGATGGAAAGCATCGATTGGACCTTGGGAGGAGAGACCTGGTCACTTTGGTGATGTTTGGATGTACTGGACTGATGACGGACTTGGCTATTTTGAGTTTCTCCAAGTAAGTGTCAGCCATAATGATCAAGTTGATACTTCAGCGGTCTTACCTCTTGTGCAAGAAGCCCTTGATGGAATTGAGTTTGCAAGAGGCGATCCCACTTCAAATTGGGGTTCTCTTAGAGCTGCTATGGGACACCCCGAGCCATTTGACCTAAGATATGTTGCTGTTGGGAATGAAGATTGTGGAAAAAAGAACTATCGAGGAAACTACCTGAAATTCTACAGTGCAATAAAAAGTACTTATCCAGATATCCAAATTATCTCAAATTGTGATGGTTCTTCTCGACCTTTAGATCATCCTGCTGATATGTATGACTATCATGTTTATACAAATGCGAATGACATGTTTTCTAGAGCTAACACATTTGATCAGACATCAAGAAATGGTCCAAAGGCTTTTGTAAGTGAGTATGCTGTGACTGGAAAAGATGCTGGGACTGGAAGCCTGTTGGCAGCCCTAGCTGAAGCTGGGTTCCTTATTGGACTGGAAAAGAACAGTGATGTTGTCCACATGGCCAGCTATGCTCCACTTTTTGTTAATGCCAATGATAGGAGGTGGAACCCAGATGCAATTGTTTTCAACTCCTTTCAGCTCTATGGAACTCCTAGCTATTGGGTGCAATTATTTTTCTCGGAGTCAAGTGGAGCAACACTTCTAAGTACCTCACTTCAAGGAACTTCCTCAAATTCAATTGTTGCATCAGCAATTACATTTCAAAATTCTGCGAATAAGCAAAATTACATACGAATAAAGGTTGTGAACTTCGGTACCAGCACTGTGAACCTCAAAATATCTCTTGACGGACTGGAAAACTCATTTCAATTGTCTGGTTCAACAAGGACTGTGCTTACATCTGCAAATGTAATGGATGAGAACTCCTTCTCACAGCCAAAGAAGGTGGTGCCAATCCAGAGTCTACTTCAGAATGCTGGGAAGGACATGAATGTTACAGTCCCACCACGTTCGTTCACATCATTTGATTTGCTGAAAGAATCCAGTAATTTGAAGATGACAAGGAGCGATTCTTCCATGTGGTCTTCTATTTAACGGAATAAAAAATTAGACAAAAAAGCAGTGAAAAAAAAAAATAAAGGGAAGGAATGGGGTATATGCAGTAGCTGCAATTAACTATATAATAAGTTTGATACGTTGTCCTGTAATTAAACAATGTTGCACTGTAAATAATATTTATGCGGTTTCATATAGAGAATTTCTGC 2407 0.4022 MGSSKASCSVSLLLLFIVVCFSFECLATKKHADLSTTLIVNASDASSRPIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNTPSNIDPWSIIGNESLINVETDRTSCFDRNKVALRLEVSCDSKGDNVCPADGVGVYNPGFWGMNIEQGKKYKVVFYVRTTESLNLTVSLTGSNGVGSLASSVITGSALNFSNWTKVETLLVAEATNHNSRLQLTTTNKGVIWLDQVSAMPLDTYKGHGFRTELVEMLAALKPRFIRFPGGCFVEGEWLRNAFRWKASIGPWEERPGHFGDVWMYWTDDGLGYFEFLQVSVSHNDQVDTSAVLPLVQEALDGIEFARGDPTSNWGSLRAAMGHPEPFDLRYVAVGNEDCGKKNYRGNYLKFYSAIKSTYPDIQIISNCDGSSRPLDHPADMYDYHVYTNANDMFSRANTFDQTSRNGPKAFVSEYAVTGKDAGTGSLLAALAEAGFLIGLEKNSDVVHMASYAPLFVNANDRRWNPDAIVFNSFQLYGTPSYWVQLFFSESSGATLLSTSLQGTSSNSIVASAITFQNSANKQNYIRIKVVNFGTSTVNLKISLDGLENSFQLSGSTRTVLTSANVMDENSFSQPKKVVPIQSLLQNAGKDMNVTVPPRSFTSFDLLKESSNLKMTRSDSSMWSSI 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01489 661 Gene3D - 71 229 - -
Pste5g01489 661 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 1 648 - -
Pste5g01489 661 Gene3D - 524 641 IPR013780 -
Pste5g01489 661 FunFam Alpha-L-arabinofuranosidase 1 524 642 - -
Pste5g01489 661 Pfam Carbohydrate binding domain 73 221 IPR003305 GO:0016798
Pste5g01489 661 SUPERFAMILY Glycosyl hydrolase domain 514 639 - -
Pste5g01489 661 SUPERFAMILY (Trans)glycosidases 214 531 IPR017853 -
Pste5g01489 661 Gene3D Glycosidases 230 523 - -
Pste5g01489 661 FunFam Alpha-L-arabinofuranosidase 1 232 524 - -
Pste5g01489 661 Pfam Alpha-L-arabinofuranosidase C-terminal domain 449 635 IPR010720 GO:0046373|GO:0046556
Pste5g01489 661 SMART alpha_l_af_c 448 635 IPR010720 GO:0046373|GO:0046556
Pste5g01489 661 FunFam Putative alpha-L-arabinofuranosidase family protein 71 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01489 Pste-Chr5 9520508 9530775 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01489 1 656 Glycoside Hydrolase AT3G10740 66.914 0.0 936
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01489 5 9520508 9530775 Pste5g01489 5 9520508 9530775 ECH