Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01428 GTGGCAATATACTATACATCTCTTCTGGTTTCATACCCTAGGCATTATGTCCAACCCCAAATGGCCAAATCTTATGCTGACATTCCCATTTTAGACCTTTCTCAGCCATCGCAGCCATCTTCTCTATCCTCTCTCTATAAAGCAAGCAAAGATTGGGGGTTTTTCCACATAATCAACCATGGAATCTCCAAAGATCTTTGCAGTCAGATCCAGTCTCTATCCAAACACATCTTCAGCCTCTCTTTGGATACTAAACTTAGACTTGGACCTTTGTCATCTTTAAAATCTTATACTCCTCATTTCATTGCCTCTCCATTCTTTGAGAGCCTCCGAGTTAATGGACCCATTTTTTATGTTTCCGCTAATAGTTCTGCTGAAATCCTCTTTGACAAAAAGGACTCCAAATTCAGTGTGATAATGCAAGAATATTGCAGTAAGATGGAAGATTTGTCTAAGAGAATTCTAAAGCTTGTATTGATGGGCATAGGGGATGGCATTGAGAAGAAGTTTTATGATTATGAGTTCAAGAAGTGCCACGGTCACTTGAGGATAAACAATTACTCAGCCCCAGAAATTATGGAAGATGAAGTTGAGGGACTTGGTATGCATACTGATATGAGTTGTATTACTATCTTATATCAAGATGAGATAGGAGGGCTTCAAGTGAGATCAAATGAGGGAGAGTGGATAGATATATGCCCAACTGAGGGAACCCTAGTTGTGAACATAGGTGATATGTTGCAAGCTTGGAGCAATGACAAACTGAGGTCCTCAGAACATAGAGTTGTTTTGAAGCATCATGTGAACCGCTTTTCTCTTGCATTCTTTTGGTGCTTTGAGGATGACAAGGTGATTTTGGCACCAGATGAAGTTGTTGGAGATGGAAACAAGAGGAAGTACAAACCTTTTGTGTATTTAGACTATTTGAAATTTAGAGAGAATAATGAGAAAGGAAGATTTGATAAGGTTGGTTTCACAGTTAGAGATTTTGCTGGGATCAAGGCCCCAGCTGTAAATCGTTGCAAAAGTTAA 1032 0.3934 VAIYYTSLLVSYPRHYVQPQMAKSYADIPILDLSQPSQPSSLSSLYKASKDWGFFHIINHGISKDLCSQIQSLSKHIFSLSLDTKLRLGPLSSLKSYTPHFIASPFFESLRVNGPIFYVSANSSAEILFDKKDSKFSVIMQEYCSKMEDLSKRILKLVLMGIGDGIEKKFYDYEFKKCHGHLRINNYSAPEIMEDEVEGLGMHTDMSCITILYQDEIGGLQVRSNEGEWIDICPTEGTLVVNIGDMLQAWSNDKLRSSEHRVVLKHHVNRFSLAFFWCFEDDKVILAPDEVVGDGNKRKYKPFVYLDYLKFRENNEKGRFDKVGFTVRDFAGIKAPAVNRCKS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01428 343 SUPERFAMILY Clavaminate synthase-like 13 314 - -
Pste5g01428 343 Gene3D - 4 311 IPR027443 -
Pste5g01428 343 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 178 280 IPR005123 -
Pste5g01428 343 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 28 310 - -
Pste5g01428 343 FunFam Gibberellin 20-oxidase-like protein 20 311 - -
Pste5g01428 343 Pfam 2OG-Fe(II) oxygenase superfamily 181 277 IPR044861 -
Pste5g01428 343 Pfam non-haem dioxygenase in morphine synthesis N-terminal 28 90 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01428 Pste-Chr5 9106207 9107602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01428 19 308 Glycosyltransferase AT5G59530 28.165 4.40e-23 96.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01428 5 9106207 9107602 Pste5g01428 5 9106207 9107602 ECH
Pste5g01428 5 9106207 9107602 Pste6g02104 6 9934602 9935718 PCT