Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01417 ATTCACACCACCTGGCTCATGCTCCTCTTTCAATCTTCACTTACAAACTAAACTCTTTCCCTTCGCTTCTTCTGATTCGCATTCAACAGTAGCTGCGTTCGTTTTCATTTCTCTTTCTCTGTAGTTTTTTTGTTATCTGGTTGCGTTTCGTAGCTATTCAATAATGGCCAAAGGCGTAATCTCAGACGAAGAAGACTACGTCGAACTTGACGAGGACGAGAGGGAACCCGTCGACGGAGACGAGGAAGAGGGTCGCGATGTGGACAATGAAGACGAGGACGAAGAAGAGGAAGGTCAGGATGAATATGAAAATGACGGATTTATAGTGGATGACATTGAGGATGAAGAGGAGCAGGATGAAGAAGAAGAGAGAGCAGAAAGTGATGAGGAGCGACAGAAGAAGAAAAAGAGGAAGAAGAAGGAGGAGTATGTCCTTGATGAAGATGATTATGAATTGTTGGAGGACAATAATATCAATATTCACCGTCGGAAGGAGAGCAAAAAGTTCAAGCGATTGAAAAAAGGCCGGAGGGATACTGAGGATGATCCCTCTGGGTTGTCTGATGAGGAGGAGTTTGTTGGAAGTGGTAAAGTTGGGCGAACTGCCGAGGAGAAGCTTAAACGCAGTTTATTTGGTGATGATGAAGGAGCTCCACTTGAAGATATTGCTGAAGAGGAGGAGCAAGGAGAAGAGGAAGAGGATGCTGACATTGGAGAAGATGATGAAATGGCTGACTTCATTGTGGATGAAGAAGAAGTCGATGAGAATGGAGCTCCTATGAGGCAGAGGAAACTGAAGAGAAAGAAAACTAGGCAGGCACCAGGAGTCTCTTCTTCTGCTCTACAGGAAGCTCAAGAATTATTTGGTGATCCAGAGGAGTTGATTATGAATCGTCAGAGAAATCTAGAAATGAGGGAATTTAGAGAAACTAGACTTGAAGATGAATTTGAGCCTATTGTTCTTTCTGAGAAATATATGACAGAGAAGGATGACCGGATTAGGGAGCTTGATATTCCTGAGAGAATGCAGATATCAGAGGAGAGTACTGGTGCTCCTCCATTGGATGGAAGTAGTATAGATGAAGAGAGTCAATGGATAAGTAATCAAATTAAAAATGGAGCAGTCCCTTGGATTCCCAAGAAGATCTCAACGTCCCAAAATAATGAAAATGATGACGACCTACCAGTCGACAAGGACGATATTATCAGATTTTTGGAACTCCATCATGTCCAAAAATTAGATATTCCTTTTGTTGCTATGTATAGGAAGGAGGAAATTTTAAGCCTATTAAAAGACCTAGAGCAACCTGAAGCTGCTGATGATAATTGGGATAAGAATGATAAGGCACCTACTCTGAAATGGCACAAGGTACTTTGGGCTCTTCAGGACTTAGACAAGAAGTGGTTGCTTCTTCAAAAGCGGAAGATTGCCCTCCAACAATACTATAGTAAACGGTTTGAAGAAGAGTCCCGCCGTGTGTATGATGAAACAAGACTAAACTTGAATCGTCAATTATTTGAGTCAGTTATGAGATCGCTGAAGGAAGCTGAATCTGAGAGGGAGGTTGATGATGTTGACTCCAAGTTCAACCTGCATTTCCCACCAGGTGAAGCTGGTGTTGATGAAGGACAATACAAGAGGCCAAAAAGGAAGTCAATGTATAGCACTTTCAGTAAAGCAGGTTTATGGGAGGTTGCAAGCAGGTTCGGGTGTAGTCCTGAGCAACTTGGATTATGTCTAACTGTAGTTAATTTGCAAGAGTTGGAAGATCCAAAGGAAACACCAGAAGAGATGGCTTCTAACTTTACATGCGCTATGTATGATACCCCTGAAGAAGTACTTAAATGTGCCAGGCACATGGCTGCTGTTGAGATAAGTTGTGAGCCCAGCATTAGGAAACATGTTCGTAGCCACTTTCTTGACCATGCAGTTGTGTCAACTTGTCCTACTGCTGATGGAAATACAACAATAGATTCTTTCCATCAGTTTGCTGGGGTAAAATGGTTGCGGGAGAAGCCTTTGTCTAAGTTTGAAGATGTGCAATGGCTCCTTATACAGAAGGCAGAAGAGGAAAAACTTATTCAAGTTACTATTAAACTGCCAGAGGAATATCTTAATAAGTTAATAGACCAATTCAATGAGTATTATATTAGTGACAGTGTTAGCAGATCTGCCCAACTGTGGAATGAACAGAGGAAGTTAATACTGCATGATGCCATTTTTCGATTCCTTTTACCATCAATGGAAAAAGAGGCAAGAGGTGTCCTGGCAAGTAAAGCAAAGAATTGGTTACTTATGGAGTATGGGAAGGCCTTATGGAATAAGGTTTCTGTTGGACCTTATCAACAAAAGGAAAATGATCTTGGCTCAGATGACGAGGCTGCTCCTAGGGTTATGGCCTGCTGTTGGGGCCCTGGAAAACCACAGACCACATTTGTCATGTTAGATTCATCAGGAGAAGTTCTAGATGTGCTTTACACTGGATCCCTTACTTTTAGGTCACAGAATGTTAATGACCAACAACGGAAGAAGAATGACCAGGAACGGGTGTTGAAGTTTATGACAGATCACCAACCACATGTTGTTGTTTTAGGAGCAGTTAACTTGTCTTGTACCCGTTTGAAGGAAGACATATATGAGGTCATTTTTAAGATGGTGGAGGAAAACCCTAGGGATGTTGGGCATGAAATGGATGGGCTCAGCATTGTCTATGGGGATGAATCTCTTCCTCGTCTTTATGAAAATTCTCGAATTTCCTCTGAACAACTTCCTTCACAGCAAGGTATAGTGAGACGGGCTGTTGCTCTTGGGCGTTATCTCCAGAACCCATTGGCTATGGTTGCTACATTATGTGGACCTAGAAAGGAAATCTTGTCATGGAAACTGAGCCCTTTGGAGAGTTTTCTTAACTCAGATGATAAATTTGCAATGGTTGAGCAGGTTATGGTAGATGTGACCAATCAGGTTGGCTTAGACATTAATTTAGCAATTAGTCATGAGTGGTTATTTTCTCCATTACAATTTATTTCTGGGCTTGGTCCACGGAAGGCTGCATCCTTACAGAGATCCCTGGTAAGAGCTGGAGCAATTTTTACTCGGAAGGACTTTTTAACAGAACATAAGCTTGGTAAAAAGGTGTTTGTTAATGCGGTTGGTTTCTTGCGTGTTCGGCGAAGTGGGTTGGCTGCTAGCAGCAGTCAATTTATTGATTTGCTGGATGATACAAGAATTCATCCTGAATCTTATATTCTTGCACAAGAGTTGGCCAAAGATGTGTATGAAGAAGATGGCACAGGTGATGCAAATGATGATGATGATGCACTGGAGATGGCCATAGAACATGTGAGAGATCGACCTAGTTATTTGAAAAACCTTGATGTTGAGGAATATGCTTCTGGAAAGAAACGTCAGAACAAAATACAAACTTTCTATGACATAAAAAGAGAATTGATCCAAGGTTTTCAGGATTGGCGTAAGCAATATGAAGAACCAAGTCAAGATGAGGAGTTCTATATGATTTCAGGTGAGACTGAAGAGACCCTTGCTGAAGGCAAAATCGTGCAAGTCACAGTACGCAGAGTGCAAGCCCAGAAAGCAATATGTGGGCTTGAATCTGGAATGACTGGAATCCTCATGAAGGAAGACTATACAGATGACTGGAGAGATGTGGTTGAATTATCAGATAGGCTACATGAAGGTGACATGCTCACTTGTAAAATCAAGTCAATCCAAAAGAATAGGTATCAAGTCTTCCTAGTTTGTAAAGATAGTGAAATGAGAAGTAATAGGTTACAGAATAACCGAGATATTGATCCCTATTACCATGAAGACCGGAGCTGTTTTCAGAATGACCAAGAGAAAGCTCGGAAAGAAAAGGAGCTTGCAAAGAAGCATTTTAAACCAAGGATGATTGTCCATCCACGCTTTCAGAACATTACTGCAGATGAAGCAATGGAGTTCTTGTCTGACAAAAAACCTGGAGAAAGCATTATCCGTCCTAGTTCACGAGGACCTTCATATCTTACTTTAACTCTTAAAATTAATGATGGAGTTTATGCCCATAAGGATATAGTTGAAGGTGGGAAGGAACACAAGGACATCACAAGCTTGCTACGAATTGGAAAGACACTAAAAATTGGAGAGGATACTTTTGAGGATTTAGATGAGGTTATGGACCGATATGTTGATCCCCTGGTGGCTCACTTAAAGGCAATGTTAAACTATCGCAAATTCCGAAAGGGTACAAAAACAGAAGTTGATGAACTGTTGAGGATGGAGAAGGCCGAGTATCCTATGCGCATAGTCTATAGCTTTGGCATCTCTCATGAGCATCCTGGCACATTTATATTAACTTATATAAGAAGTACAAATCCACACCACGAGTACATTGGGCTTTACCCAAAAGGATTCAGGTTCAGGAAAAAGATGTTTGAGGACATTGATCGGCTTGTGGCATATTTTCAGAGGCACATTGATGATCCTCAGCATGATTCAGCCCCCTCCATTAGATCTGTTGCTGCTATGGTACCAATGCGAAGCCCTGCAGCTGGTGGCTCATCAGGGGCATCTGTGGGTAGTGGCTGGGGTGGTGGTTCAAACAGTGAGGGTGGCTGGAGAGGTCACTCCTATGATAGGGATCGATCATCTACTCCTGGTTCCAGAACAGGACGAGGTGAATACAGAAACAATGGGAATCAGGATGAACATCCTAGTGGAGTGCCTCGTCCATATGGTGGTGGACGTGGGCGTGGGCGTGGTCGAGGTTCTTATAACAATAGAGGACACAACAATAATAATGAGAGACAGGACTCTGGTTATGGGGGAAGATGGGGTTCTAATAATAATACAAAAGATTCGGATGATGGTTTAAACAGTTTTCCAGGGGCCAAGGTTCAAAATTCTCCCGGAAGGGAAGCTTTTCCTGGTGGTTGGGGTGGCGGTGGTGGAAGTGGTGGTGGAAGTGGTGGAGGCAGTGGTGGAGGTAGTGGTTGGGGAGGAGGTGGAGCTAATAATAATGACAATGGTGGCTGGCGGGGACAAACAAGTGGTGGTGCTGGTCCAAGTGATGGTGAACATGGAAGCTCAGGCTGGGGAACTGCCCCCAAGAAAGCAGCAAATGGAAATGGATGGGGATCTGGAAATTCTGGCGGTTGGTGAGCTCACCTCGGAGAATTTAGTTTAGCTTTACCCGCAGACTGTAGGTTGATCCTGAAGTAACTTATGTAATCCTCTTTTTTACCTGAAATGAATGGATCATGATATTTGGGTAGTTTCTTTTTTGCTGCAATGTAATGAAATTCTGACTGTTTCCTTCAACTTGGATCCCTTCTTGTGTGGATGGTTGGGATGTCATGTATAAAACGCATTTGTTCATAACTACATGATCTGGTCCACTTCTCCACTGCTTGGACTTGTATTCGAAAGCGAAAAGATGATTCTTCGGTCCACAATGTTCC 5457 0.4261 MAKGVISDEEDYVELDEDEREPVDGDEEEGRDVDNEDEDEEEEGQDEYENDGFIVDDIEDEEEQDEEEERAESDEERQKKKKRKKKEEYVLDEDDYELLEDNNINIHRRKESKKFKRLKKGRRDTEDDPSGLSDEEEFVGSGKVGRTAEEKLKRSLFGDDEGAPLEDIAEEEEQGEEEEDADIGEDDEMADFIVDEEEVDENGAPMRQRKLKRKKTRQAPGVSSSALQEAQELFGDPEELIMNRQRNLEMREFRETRLEDEFEPIVLSEKYMTEKDDRIRELDIPERMQISEESTGAPPLDGSSIDEESQWISNQIKNGAVPWIPKKISTSQNNENDDDLPVDKDDIIRFLELHHVQKLDIPFVAMYRKEEILSLLKDLEQPEAADDNWDKNDKAPTLKWHKVLWALQDLDKKWLLLQKRKIALQQYYSKRFEEESRRVYDETRLNLNRQLFESVMRSLKEAESEREVDDVDSKFNLHFPPGEAGVDEGQYKRPKRKSMYSTFSKAGLWEVASRFGCSPEQLGLCLTVVNLQELEDPKETPEEMASNFTCAMYDTPEEVLKCARHMAAVEISCEPSIRKHVRSHFLDHAVVSTCPTADGNTTIDSFHQFAGVKWLREKPLSKFEDVQWLLIQKAEEEKLIQVTIKLPEEYLNKLIDQFNEYYISDSVSRSAQLWNEQRKLILHDAIFRFLLPSMEKEARGVLASKAKNWLLMEYGKALWNKVSVGPYQQKENDLGSDDEAAPRVMACCWGPGKPQTTFVMLDSSGEVLDVLYTGSLTFRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSCTRLKEDIYEVIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSEQLPSQQGIVRRAVALGRYLQNPLAMVATLCGPRKEILSWKLSPLESFLNSDDKFAMVEQVMVDVTNQVGLDINLAISHEWLFSPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFLTEHKLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYILAQELAKDVYEEDGTGDANDDDDALEMAIEHVRDRPSYLKNLDVEEYASGKKRQNKIQTFYDIKRELIQGFQDWRKQYEEPSQDEEFYMISGETEETLAEGKIVQVTVRRVQAQKAICGLESGMTGILMKEDYTDDWRDVVELSDRLHEGDMLTCKIKSIQKNRYQVFLVCKDSEMRSNRLQNNRDIDPYYHEDRSCFQNDQEKARKEKELAKKHFKPRMIVHPRFQNITADEAMEFLSDKKPGESIIRPSSRGPSYLTLTLKINDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKAMLNYRKFRKGTKTEVDELLRMEKAEYPMRIVYSFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFRFRKKMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSPAAGGSSGASVGSGWGGGSNSEGGWRGHSYDRDRSSTPGSRTGRGEYRNNGNQDEHPSGVPRPYGGGRGRGRGRGSYNNRGHNNNNERQDSGYGGRWGSNNNTKDSDDGLNSFPGAKVQNSPGREAFPGGWGGGGGSGGGSGGGSGGGSGWGGGGANNNDNGGWRGQTSGGAGPSDGEHGSSGWGTAPKKAANGNGWGSGNSGGW 1664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01417 1664 SMART S1_6 1128 1201 IPR022967 -
Pste5g01417 1664 FunFam Transcription elongation factor spt6 490 748 - -
Pste5g01417 1664 Pfam HHH domain 1017 1104 IPR041692 -
Pste5g01417 1664 MobiDBLite consensus disorder prediction 73 92 - -
Pste5g01417 1664 MobiDBLite consensus disorder prediction 286 305 - -
Pste5g01417 1664 FunFam Transcription elongation factor spt6 1350 1443 - -
Pste5g01417 1664 SUPERFAMILY SH2 domain 1255 1341 IPR036860 -
Pste5g01417 1664 SUPERFAMILY RuvA domain 2-like 1016 1105 IPR010994 -
Pste5g01417 1664 FunFam Transcription elongation factor spt6 907 1005 - -
Pste5g01417 1664 MobiDBLite consensus disorder prediction 1 231 - -
Pste5g01417 1664 FunFam Transcription elongation factor spt6 1123 1211 - -
Pste5g01417 1664 FunFam Transcription elongation factor spt6 1238 1349 - -
Pste5g01417 1664 Gene3D SH2 domain 1238 1349 IPR036860 -
Pste5g01417 1664 Gene3D - 262 1005 - -
Pste5g01417 1664 Gene3D - 1123 1211 IPR012340 -
Pste5g01417 1664 FunFam Transcription elongation factor spt6 295 487 - -
Pste5g01417 1664 Gene3D - 499 935 IPR023323 -
Pste5g01417 1664 SMART rnase_8s 742 860 IPR006641 GO:0006139
Pste5g01417 1664 MobiDBLite consensus disorder prediction 1459 1664 - -
Pste5g01417 1664 SUPERFAMILY Tex N-terminal region-like 339 721 - -
Pste5g01417 1664 CDD SH2_Nterm_SPT6_like 1252 1340 IPR035019 -
Pste5g01417 1664 Gene3D - 295 498 IPR023319 -
Pste5g01417 1664 Gene3D SH2 domain 1350 1446 IPR036860 -
Pste5g01417 1664 PANTHER TRANSCRIPTION ELONGATION FACTOR SPT6 11 1505 IPR017072 GO:0032968
Pste5g01417 1664 MobiDBLite consensus disorder prediction 139 161 - -
Pste5g01417 1664 Pfam SH2 domain 1219 1436 IPR035420 -
Pste5g01417 1664 PIRSF Spt6 2 1507 IPR017072 GO:0032968
Pste5g01417 1664 Pfam Holliday-junction resolvase-like of SPT6 741 897 IPR028231 -
Pste5g01417 1664 CDD SH2_Cterm_SPT6_like 1351 1437 IPR035018 -
Pste5g01417 1664 SUPERFAMILY Ribonuclease H-like 742 897 IPR012337 -
Pste5g01417 1664 FunFam Transcription elongation factor spt6 732 901 - -
Pste5g01417 1664 ProSiteProfiles S1 domain profile. 1130 1201 IPR003029 GO:0003676
Pste5g01417 1664 MobiDBLite consensus disorder prediction 1499 1515 - -
Pste5g01417 1664 Pfam Helix-hairpin-helix motif 901 1002 IPR032706 -
Pste5g01417 1664 Coils Coil 55 88 - -
Pste5g01417 1664 Gene3D - 732 1122 IPR037027 GO:0006139
Pste5g01417 1664 MobiDBLite consensus disorder prediction 163 199 - -
Pste5g01417 1664 MobiDBLite consensus disorder prediction 10 72 - -
Pste5g01417 1664 FunFam Transcription elongation factor Spt6 1009 1103 - -
Pste5g01417 1664 Gene3D - 1011 1103 IPR042066 -
Pste5g01417 1664 MobiDBLite consensus disorder prediction 1536 1577 - -
Pste5g01417 1664 Pfam Acidic N-terminal SPT6 34 124 IPR028083 -
Pste5g01417 1664 SUPERFAMILY RuvA domain 2-like 913 1003 IPR010994 -
Pste5g01417 1664 MobiDBLite consensus disorder prediction 1611 1627 - -
Pste5g01417 1664 SUPERFAMILY Nucleic acid-binding proteins 1125 1205 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01417 Pste-Chr5 9043689 9053260 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01417 5 9043689 9053260 Pste5g01417 5 9043689 9053260 ECH