Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01398 GCAGGTTCTATGCTCTGCTTATCCAATACTGAGAGCATAGCAGATAGGGAGAAGTTTCCATGGATGACATAAGATCATTTTGTTGAATTTGAATCATGTTTTTGTGCTCTGAAATGGTATAAGAGCCTTCTCACTTTTCAATTCTCACTTTCATAGCTCCTCAGTTGCATTACCAATGGCTCTGGGTGGTTTGGTTTCCAATAGAAACTTCACTTCTTTCATTGGACCAGAAAGTGTTTATCAATCGGGAAAGGATCTGTCACCTCAAAGAAGGGGCATTTCTTGTGCATATGTTGCATGTTATGGTGGCCAGATTGAAAAGGATTCTTTCACAAGATGCTGGCATGGAATGTCTTTTCATGCTAAACAACTTTTGAATGAGAAAGTTTCAAAACCAATACCAACATTTCATGATGAAGTGCAGCATTGTTCTTCACTATCCCAGAATTTCGTTCATATGAACATGAAACTCAAGGCCGGCAGAAGATGTCAGTGCTACCTCTCTTCAGATCCCTATGGTAGTAGCCTTATTCAACAAAAAGCAGTGTATGGACCAGGTTTAAAGAAACTTGGTAAGGAAAAAATGGCTCGTGTTCATTACAAGTCTGAGGACTATGATATGACAGAAACGAATGTGGATCCTCTGGCATCAACTGAAGGGACAGGTGAAGCCATTCTCATGGAAGGAAATGTTCCACAAGTATCTTCTTGGTGGCAGCAGTTTCCTAAGCGCTGGGTTATTGTGTTGTTGTGTTTTGCTGCATTTCTGCTGTGCAACATGGACCGTGTGAATATGAGCATAGCAATACTTCCGATGTCACAAGAGTTTAATTGGAACAGTGCAACGGTTGGCCTAATTCAGTCATCTTTTTTCTGGGGCTATCTACTTACTCAGATCCTTGGTGGCATATGGGCAGACAAATTTGGTGGGAAGCCAGTGCTAGGTTTTGGGGTTGTCTGGTGGTCAATGGCAACAGTTTTAACACCTATTGCTGCAAGAATTGGGCTTCCATGTTTGCTTATTATGCGTGCCTTTATGGGGATCGGCGAGGGTGTTGCCATGCCTGCTATGAATAATATGCTTTCCAAGTGGATTCCAGTTTCAGAGAGAAGCAGATCACTTGCCCTGGTTTATAGTGGCATGTACCTTGGTTCTGTGGTTGGCTTGGCATTCTCACCATTGCTAATCCAAAATTTTGGGTGGCCATCAGTGTTTTATTCTTTTGGCTCCCTTGGAAGTATATGGTTTCTCTTTTGGTTGAGAAAGGCATATAGCATCCCAAAAGATGACCCTGATCTGGGGGTAGAGGAGAAAAGGTTTATGCTGGAAGGCAATGTATCAAATGCACCTGTTTCTTCCATTCCTTGGAAATTAATTTTATCTAAAGCGCCTGTTTGGGCTCTTATAATCTCCCATTTCTGTCATAATTGGGGGACATTTATTCTTTTAACATGGATGCCTACTTACTATAACCAGGTTCTGAAGTTGAACCTCACTGAATCTGGACTCTTGTGCGTTCTTCCATGGTTAACCATGGCTGCTTTTGCAAATATTGGTGGGTGGATTGCTGACACACTAGTGAGGAAAGGCCTCTCCATAACAGTTGTTCGAAAGGCAAGAAAGTCATTGCTCTTTTTGCAGATCATGCAATCAATTGGGTTTCTGGGTCCTGCCTTTTTCCTTTCACAATTGAGCCATGTGAGAACACCTGCCATGGCTGTACTGTGCATGGCGTGTAGTCAGGGATCTGATGCATTCTCACAATCTGGTCTGTATTCCAATCATCAAGACATTGGACCACGCTATGCTAATGTTCATGAGTTTCAAATTCAGGGTGTATTGCTTGGACTATCGAATACTGCAGGAGTGCTTGCTGGTGTCTTTGGTACAGCTGCAACTGGATTCATTCTCCAGCGAGGTTCTTGGAATGATGTTTTTAAGGTTTCTGTCGCATTGTACATAATAGGTACATTGGTGTGGAATATCTTTTCAACTGGGGAGAAAGTTCTTGACTGAAGATGACATTGTCAAGGAAGCTGTAGCCTATAATCGCCATGGAAATATAGAAACAGATTGGAACACTAATCAGATGACCAAACATGCCTTGGAAGATTAAACCTCTCAAAGACAAAAAGTAGAAAAAAAGACACCATGGAAGTTTTCACCTTAAACCATGGCCTTTATAAAAAAGTGTCTCCAAGAAATCTTGGATTAGTTTTGTACCTTTTCCACAAGACTCCTCTAAAGTGAGTTTGTCTCCAAGAGTAAGTATAAGGGTATCTACCCTTGGATTTTAGTAAGTTAAGCTTACAATACACTTTAAACTAAGTGAATATCAGATACATTGTTTTTCTTGCTTACTTTACAGCCAAATTCACTCTACTGGGGATTTTCCTATTCGCCCATGCTTGAGTCCCATGAACTTTAGTGTTTTCTGTATAGAAAGTCCGTGGGCAGTTTCCTCTTGTAAAACTTTATCCAAGCATACATAAGCTTA 2498 0.4115 MALGGLVSNRNFTSFIGPESVYQSGKDLSPQRRGISCAYVACYGGQIEKDSFTRCWHGMSFHAKQLLNEKVSKPIPTFHDEVQHCSSLSQNFVHMNMKLKAGRRCQCYLSSDPYGSSLIQQKAVYGPGLKKLGKEKMARVHYKSEDYDMTETNVDPLASTEGTGEAILMEGNVPQVSSWWQQFPKRWVIVLLCFAAFLLCNMDRVNMSIAILPMSQEFNWNSATVGLIQSSFFWGYLLTQILGGIWADKFGGKPVLGFGVVWWSMATVLTPIAARIGLPCLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLALVYSGMYLGSVVGLAFSPLLIQNFGWPSVFYSFGSLGSIWFLFWLRKAYSIPKDDPDLGVEEKRFMLEGNVSNAPVSSIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKLNLTESGLLCVLPWLTMAAFANIGGWIADTLVRKGLSITVVRKARKSLLFLQIMQSIGFLGPAFFLSQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYANVHEFQIQGVLLGLSNTAGVLAGVFGTAATGFILQRGSWNDVFKVSVALYIIGTLVWNIFSTGEKVLD 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01398 613 Pfam Major Facilitator Superfamily 193 571 IPR011701 GO:0022857|GO:0055085
Pste5g01398 613 Gene3D MFS general substrate transporter like domains 401 610 IPR036259 -
Pste5g01398 613 CDD MFS_SLC17A9_like 190 606 IPR044777 -
Pste5g01398 613 Gene3D MFS general substrate transporter like domains 184 373 IPR036259 -
Pste5g01398 613 SUPERFAMILY MFS general substrate transporter 175 605 IPR036259 -
Pste5g01398 613 FunFam ascorbate transporter, chloroplastic isoform X1 394 611 - -
Pste5g01398 613 FunFam ascorbate transporter, chloroplastic isoform X2 184 373 - -
Pste5g01398 613 ProSiteProfiles Major facilitator superfamily (MFS) profile. 189 610 IPR020846 GO:0022857
Pste5g01398 613 PANTHER SOLUTE CARRIER FAMILY 17 178 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01398 Pste-Chr5 8948151 8957403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01398 1 613 Organic Solute Cotransporters AT4G00370 69.005 0.0 798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01398 5 8948151 8957403 Pste5g01398 5 8948151 8957403 ECH
Pste5g01398 5 8948151 8957403 Pste6g02068 6 9720804 9727215 PCT