Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01392 TTGAAGCTCTTCTATTTTCTGTTTCTGTGATGTCAATGGCACTCTCCCAGCTAAGCCACTCTTTGGAAAATGAACTAAAAAGTGAAAACTCAGAATTCTCTCCCAAGGAAATTGGAAACCAAGGTCTCACAAAACTGATTCTCAGAAAAGGAGTCACTTGGAAAACTCCATTCTCTGGAGATGAAGTGGAAGTTCATTTCAGAGGACAAGTTGAAAACGGAGCAGCTTTTGAATCAAGTTATGATAAAGGGTCACCTTTTCGCTTCAAATTAGGCCAATGTGAAGTTATCAAAGGTTGGGATGAAGGAGTAGCCACCATGAAGAAAGGGGAAAGAGCTATATTCAAAATACCACCTAACTTGGCATATGGGGCAGCAGGGTCTCCCCCACTGATTCCTCCTAATGCAACACTCATTTTTGACATTGAAATGCTGTCTTGGAGTACCATAAGGGATTTGACTGGTGATGGAGGAATAAAAAAAAAGACAATAAGAGATGGAGAAGGATGGGCAACTCCCAGAGAAGCTGATGAGGTGCTAGTGAAATACGAAGCCAGACTAGAGAATGGGATGCTTGTCTCCAAGACTGATCAGGGAGTGGAGTTTAATGTAAGTGATGGTTATCTATGTCCTGCTATGGGTATAGCAGTAAAGACAATGAGAAAGGGCGAGGTAGCAGAACTAGCTGTGAGATTCTCTTATGGGCTCAATGAAAATTCAAATGGAACCACTGAGCTAGATGATGTTCTTCCACCAGATTCTAATTTGACTAGCATCAAGGTTGAGCTGGTATCATGGAAAACTGTTACTGATGTCTCGGGAGATAAGAAGATATTGAAAAAAATTAAGAAAGTTGGTGAGGGGTTTGATCGTCCTAACGAGGGATCCCAAGTGAAAGTGGTATATTTATGTAAAGGGGAAGATGGTACGATTATTGAGAGGAAAGGTTCAGAAGAAGAACCCTTTGAGTTTACAACTCAGGAAGAACATGTACCCGAGGGTCTAGAAAGAGCAATAATGACAATGAAAAAAGCAGAGCAAGCGCTGGAAAAGCCATTTTGGAAAATGGACACGCAAGAGAAAATAGAAGTTTGTGAGAGGAAGAAGCATGATGGAAATCTGTTGTTCAAGGCAGAAAATTTCAGGCGTGCATCCAAGAAATATGAAAAGGCTGTAAAATACATCGAATTTGATCACTCATTCAGTGAAGATGAGAAGCAACGGGCTAATGCCTTACGTTTATCCTGTAATTTGAACGGTGCTGCATGTAAACTTAAATTGGGAGAGTACATTGAAGCTTCAACTCTATGCACAAAGGTCCTAGAACAAGACCCTTTAAATATAAAGGCTCTCTATAGAAGATGTCAAGCATACTTGAAAACATCAGACTTGGAGAAAGCTGAGGCTGACATTAAAAGAGCTTTGGTTATTGATCCAAATAACAGAGACATTAAACTTGAGTACAAAGAGCTGAAACTTAAGCAAAAGGAATACAGTAGATATGAAGCCGACATCTTCAGCACAATGTTTTCAAAGATGAGCTAGTTCAGAAAGCGAATTTGCGTTCCAAGCTACCCTTTGAAGTAGAAACAACCTCTACGGCTCCACCTATATTATAATTTTTATTTTAAACTATACCTATGTTTGTTTGTTTTTTTTCATAGACAAAAATTACTTGTTAACATGTCAGTTTTGTTAATAAAGAGAATTGAACTCACGAGGTAACATGTCACTTTTTTTAAAGAGAATCGAGTTTTTCTTTCTGC 1765 0.3898 MSMALSQLSHSLENELKSENSEFSPKEIGNQGLTKLILRKGVTWKTPFSGDEVEVHFRGQVENGAAFESSYDKGSPFRFKLGQCEVIKGWDEGVATMKKGERAIFKIPPNLAYGAAGSPPLIPPNATLIFDIEMLSWSTIRDLTGDGGIKKKTIRDGEGWATPREADEVLVKYEARLENGMLVSKTDQGVEFNVSDGYLCPAMGIAVKTMRKGEVAELAVRFSYGLNENSNGTTELDDVLPPDSNLTSIKVELVSWKTVTDVSGDKKILKKIKKVGEGFDRPNEGSQVKVVYLCKGEDGTIIERKGSEEEPFEFTTQEEHVPEGLERAIMTMKKAEQALEKPFWKMDTQEKIEVCERKKHDGNLLFKAENFRRASKKYEKAVKYIEFDHSFSEDEKQRANALRLSCNLNGAACKLKLGEYIEASTLCTKVLEQDPLNIKALYRRCQAYLKTSDLEKAEADIKRALVIDPNNRDIKLEYKELKLKQKEYSRYEADIFSTMFSKMS 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01392 504 FunFam Peptidylprolyl isomerase 343 498 - -
Pste5g01392 504 PANTHER PEPTIDYLPROLYL ISOMERASE 21 137 - -
Pste5g01392 504 SUPERFAMILY FKBP-like 142 260 - -
Pste5g01392 504 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 285 337 IPR001179 GO:0003755
Pste5g01392 504 Pfam Tetratricopeptide repeat 439 471 IPR001440 GO:0005515
Pste5g01392 504 Gene3D Tetratricopeptide repeat domain 341 498 IPR011990 GO:0005515
Pste5g01392 504 ProSiteProfiles TPR repeat profile. 438 471 IPR019734 GO:0005515
Pste5g01392 504 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 166 257 IPR001179 GO:0003755
Pste5g01392 504 SMART tpr_5 404 437 IPR019734 GO:0005515
Pste5g01392 504 SMART tpr_5 355 388 IPR019734 GO:0005515
Pste5g01392 504 SMART tpr_5 438 471 IPR019734 GO:0005515
Pste5g01392 504 Gene3D - 141 257 IPR046357 GO:0003755
Pste5g01392 504 SUPERFAMILY TPR-like 345 502 IPR011990 GO:0005515
Pste5g01392 504 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 47 135 IPR001179 GO:0003755
Pste5g01392 504 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 162 246 IPR001179 GO:0003755
Pste5g01392 504 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 281 338 IPR001179 GO:0003755
Pste5g01392 504 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 50 138 IPR001179 GO:0003755
Pste5g01392 504 Gene3D - 258 340 IPR046357 GO:0003755
Pste5g01392 504 SUPERFAMILY FKBP-like 24 136 - -
Pste5g01392 504 FunFam Peptidylprolyl isomerase 5 139 - -
Pste5g01392 504 SUPERFAMILY FKBP-like 256 338 - -
Pste5g01392 504 Gene3D - 22 140 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01392 Pste-Chr5 8932161 8938174 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01392 27 503 Calmodulin-binding Proteins AT5G48570 51.445 0.0 524
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01392 5 8932161 8938174 Pste5g01392 5 8932161 8938174 ECH