Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01389 TTTTTTCCTTCTCCTGGATCTGCTGGGAGAAGTGCTGCATGCTCTGAACTTTTACACTTTCACATATGGCCTCTTCGTATCCTGGTTGGTTCCTACTTTGTAGGACAGTATTATCAGATTCTTCGTCAGCAGCCCAATCTCGTTCACCAGTTCTACTCCAATTCCAGCACCATGATTCGCGTTGACGGAGATTCTGTTGAAACCGCCGACGATTTGATGCAAATTCATTCAATTGTCTCATTACTGAATTTTACTACAATTGAGATCAAGACAATCAATTCTCTTGACTCTTGGGATGGAGGTGTGCTTGTGATGGTCTCAGGTTTTGTGAAGATAAAGGATATCAATGGGAGGCGGAAGTTTGTCCAAACATTCTTTCTTGCTCCTCAGGAGAAGGGCTTCTTTGTACTGAATGATATGTTTCATTTCATCGAAGATGCAGTGACATACCCAAATCTGGTACCAGTGGCATCTGAAACGATCGACACACAACCACATGTATCTGCTTCTCTTGCAGATCCACCAGCAGCTTCAGACTACGGTTTGGAGGAAGAAGCTAGAGAATATGTCAACTCAGTTCATATAGATGATGATCCAGTGGACAAATACAGTCTTCCTGAGCATCAGCAGCAGCTACAAGATGATCTTGAAACTGAAATTGTGGTGGAGGAAACTCCAGTGCAGGAGGCATCTCCACCAATTCATAGCGTTGCACACACTGTCCAAGAACCCCCTGCTTCTCATGTGGAAGAGTCTTTGGAGGAGCCTCCCAAGAAAACTTATGCATCTATTTTACGAGTCTCCAAAGGGCTGCCAGTATTATCAGCTGCTCCGCAGCATGCTCCACAACAATCTTTTAAAAGTGCTCCACCTCCTTCAGAGTTGAACCATGTAGCGCAGCCTGTTGTTCAGCAGTCAAGCTCTGCAACTATGTACGTTCCAGAGTCAGGGGCAGAGGCAGTAGATGAAGTCTATGGACTAGAAGAAGAAGATGAAGTAACGTCTGTCTATGTTAGAAACTTGCCTGCTAATGTTACTGAAGTGGAGATTGACCAGGAATTTAAGAATTTTGGCAGAATTAAGCCAGATGGAATATTCATTAGAGTCCGAAAGGAAATTGGAGTCTGTTATGCATTTGTGGAATTTGAAGACATTATTGGTGTTCAAAATGCACTTCAGGCCTCTCCAATTCAATTGGCTGGAAGACAAGTATACATAGAGGAGCGGAGGCCAAACAGTGTTGGTGCGGCCCGTGGTGGAAGAAGGGGAAGAGGCAGAGGTGGTTATCAAACAGATGCTCCTAGAGGTCGTTTTGGTGCTAGAAGCATGGGAAGGGGAGCTCATCAGGATAGTTCAGACTACACCAGACTAAGAGGTGATGGTTATCTTCAGCGTGGTTCACGATGAGGAAAATGTGGCAATAGCAATGCACTGAGATGCCATTGAAGGGCTTTATACAATTAGTGAATCTGTGCTTGGTGTTGGTATTTGCTACGGAACATTCTTCTGTGGTTTCACATAAAGTAGTCTTACGTTTCGAGTGCGTCTTTTTCAAGTAAAAGCCATTGGGACTTAACTAGTTTGTTTTGCAAGCATAGATCAGTTGGTTCCCCTTGAATGTTATTTATTATGCCATTCAGGTGGGGAGTTTTGGTTATTTTATATTGACCCGTGTCTGGATTGTGGGTGCCTTTTGATGAGAAGGGTGTTGAAAGTAACCAAGTGGTATTAATCTTGAGTAGAGGTTGTGCTTAATTATCAGATGTTGCCGTGCATTTTTGTGTGCATCGGCTCGTTGCCTTTGTTAAAACTTATTTTGATATCATGGGAATTTTTAATTTTTTTGTTCAATCTAA 1856 0.43 FFPSPGSAGRSAACSELLHFHIWPLRILVGSYFVGQYYQILRQQPNLVHQFYSNSSTMIRVDGDSVETADDLMQIHSIVSLLNFTTIEIKTINSLDSWDGGVLVMVSGFVKIKDINGRRKFVQTFFLAPQEKGFFVLNDMFHFIEDAVTYPNLVPVASETIDTQPHVSASLADPPAASDYGLEEEAREYVNSVHIDDDPVDKYSLPEHQQQLQDDLETEIVVEETPVQEASPPIHSVAHTVQEPPASHVEESLEEPPKKTYASILRVSKGLPVLSAAPQHAPQQSFKSAPPPSELNHVAQPVVQQSSSATMYVPESGAEAVDEVYGLEEEDEVTSVYVRNLPANVTEVEIDQEFKNFGRIKPDGIFIRVRKEIGVCYAFVEFEDIIGVQNALQASPIQLAGRQVYIEERRPNSVGAARGGRRGRGRGGYQTDAPRGRFGARSMGRGAHQDSSDYTRLRGDGYLQRGSR 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01389 468 Gene3D - 319 456 IPR012677 -
Pste5g01389 468 PANTHER RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN 29 459 IPR039539 -
Pste5g01389 468 SMART rrm1_1 335 407 IPR000504 GO:0003723
Pste5g01389 468 Pfam Nuclear transport factor 2 (NTF2) domain 29 143 IPR002075 -
Pste5g01389 468 SUPERFAMILY NTF2-like 22 145 IPR032710 -
Pste5g01389 468 SUPERFAMILY RNA-binding domain, RBD 329 439 IPR035979 GO:0003676
Pste5g01389 468 CDD NTF2 29 145 IPR018222 -
Pste5g01389 468 ProSiteProfiles Nuclear transport factor 2 domain profile. 29 143 IPR018222 -
Pste5g01389 468 MobiDBLite consensus disorder prediction 411 468 - -
Pste5g01389 468 FunFam Nuclear transport factor 2 family protein 24 147 - -
Pste5g01389 468 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 336 399 IPR000504 GO:0003723
Pste5g01389 468 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 334 419 IPR000504 GO:0003723
Pste5g01389 468 CDD RRM_SF 336 407 - -
Pste5g01389 468 FunFam Nuclear transport factor 2 family protein 323 462 - -
Pste5g01389 468 Gene3D - 28 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01389 Pste-Chr5 8927973 8935811 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01389 5 8927973 8935811 Pste5g01389 5 8927973 8935811 ECH