Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01379 CGGATCCAATAGCCACTTGTCGCGGCCACTAGGCTGAATGAAGTGAGGCCCATCGCACTATCAGCATGTCTGTCACGTACGGCTCTGATCGCATCATTATCCATCATTAACGGCACCAGATTGAACAAAAGCATCATGCGTCATGGAGCCGCCAACTCCCACTTCTCCGCAATATAAAAGTAGCACCTCACGTTTTATAATTGCCCTACTTCGCAAATTCCAATTCTAGATTTACCACCAAAACCAGCCACCCGAGGTTTCAATTTCGTCTTCTGATCAAAAGAGCCTCAATATCTTCTCTTCGACGACGCTGTTTCTCTCTCTTGAGGTAAAGAGCTTTCATTCAAGCATGGGAGATAGCGAACCGGTGGTTACTGAAGCATCTGCTGCTGAAGCATATGCTTCGGCTGTTTATGCTGATACCGGGTCGAACCCTGTTCCTGACGCAGGTCCTCCCGTTGATCAATCTGCCGGAGAAGCTGTTCAGGTCAGTTCGACTTATGGATTTGGTTATTCTAATGTTGGTGATGCAAATGCGTATGCTGGGGATCCAAATTCTGTTCTACAACAAGCTCAATTTAGTGCAACTGTTGACTCCAAACCCGCTGGTGGAGTGGCCGATGCTAACGAGGCCTCTGCTGTGGTTGCAAGCACGGCTGCTGAATCTACCATGATTTCCGACTACAATTCATCTGGAAATGGTGGTGTTGTTGGTGTGGTGGCAAATGCTGCGGGACTTGAGAACGGAAATGCATTGGAGAATCTTGACGGATCGGCAGATTTCACTGCTTGGACATCTTTGATTGAAGAGACAGAGAAGGTAGCTGAGGACAATATATTGAAGATTCGAAGAGTCTATGATGCTTTTCTGGCAGAATTTCCCTTGTGCTATGGTTATTGGAAGAAATATGCTGACCATGAGGCACGTCTTGGCTCTATTGATAAAGTTGTTGAAGTATATGAGCGTGCTGTTCAAGGAGTTACATATTCAGTGGACATGTGGTTGCATTATTGCATATTTGCTATAAGCACATACGGGGATCTAGACACTGTTCGTAGAATGCGTGCAACAGTGATATCTCCCTTGTATGGCGGAAAAGCTTTGATGGGATTGCATGCCAGAATTTTTTCCATTCTGATTTTTCTAGTTTTTTCCCTTGTTGGAATGGTAGCTCTCTTTATCTTTGACACTCTGAGGTGCATCAATTTGCAAATTGCTGCTGAGAAGATCTCGCTTTTTGAAAGAGGATTAGCTTATGTTGGAACAGATTACCTTTCTTTTCCCCTCTGGGATAAATACATTGAATATGAGTACATGCAGCAAGACTGGGCCCGCCTTGCCGTGATCTACACCAGAATTTTAGAGAATCCAAATCAGCAATTAGATCGGTATTTCAGCAGCTTCAAAGAGTTAGCGGGAAATAGGCCTTTGTCAGAATTACGAACTGCTGATGAAGCTGCTGCAGTGGCAGGTGTTGCTTCAGAGGCTACTGGCCAAGCTACTGAAGGAGAGATTCATGCTGATGGCACAGAGCCATCTCCTAAATCTGTAAGTGCTGGCTTAACAGAAGCAGACGAGTTGGAGAAGTATATCGCCATTAGAGAAGAGATGTATAAGAAAGCTAAAGAGTTCGATTCTAAGATCATTAGTTTTGAAACAGCTATCAGGAGGCCCTACTTTCATGTAAGGCCCCTCAATGTTGGAGAGCTTGAGAATTGGCATAACTATCTGGACTTTATAGAAAGGGAAGGTGACTTAAGCAAGGTATCTTGTTATCTTCCTAATCATCTGTCACAGGCAAGGAGGGTCCCTCCTTTCATATTTGAGGGGCCTCTCTATCCCACTGAGGAATCATCTATAACAATATTACGACATTGTCTTATTGTCAAGTTGTATGAGAGGTGTGTCATTGCATGTGCCAATTATCCTGAGTATTGGATACGCTATGTTTTGTGTATGGAAGCCAGTGGAAGCATGGATCTTGCAAATAATGTACTTGCTCGAGCAACCCAAGTCTTTGTTAAGAGACAACCAGAGATACATCTTTTTTGTGCTCGGTTCAAGGAGCAGACTGGAGATATAGATGGTGCTAGAGCTGCGTATCAACTTGTGCATACTGAAACTTCACCTGGTCTTCTTGAAGCAATAATCAGGCATGCCAATATGGAATACCGACTGGGAAAATTGGAGGATGCCTTCTCTTTGTATGAACAGGCCATTGCTATTGAGAAAGGAAAAGAACATTCACAAACATTGCCAATGTTGTTTGCTCAGTATTCTCGTTTTGTTTATTTGGCATCTGGCAATGCAGAGAAGGCAAGGCAGATTCTAGTTGAGGGGCTTGAAAATGTTTTCTTGTCAAAACCACTACTTGAGGCTTTATTACATTTTGAGGCTATTCAACCCTTGCCAAAACGAGTTGATATTGACTTTCTGGAGTCCTCTGTTATCAAGTTCATAATGCCTAACTCAGAGAGTCCTGGTGTAGCAAGTCCAACTGAGCGTGAGGAACTTTCTAGTATTTTTCTGGAGTTTTTAAATCTCTTTGGAGATGTTCAATCTATCAAGAGGGCTGAGGATAGACATGCCAAATTGTTTTTGCCACACAGAAGCATGTCAGAGTTGAAAAAACGTCATGCTGAGGATTTCTTAGCTTCAGACAAAACAAAAATGCTGAGATCTTATTCCATTCAATCACCTGCTCAATCTGTAATGGGTGCATATCCAAATGCACAGAACCCGTGGACTAATTATGGAGTACAACCTCAAACTTGGCCTCCAGTTACACAAGCGCAAGGGCAGCAATGGACTGCTGGCTACTCACAGCAAGCTTCGTACGGGGCTTATGCTGGATATGGAGGTAACTATGCAAATTCTCAATTGCCTACATCAGTTCCACAAAATACTGCATACGGAGCCTATCCTCCTGCATATCCTGCACAGCCGGCTGTTCCACAACAAAATTATCCGCAAGCTGCTGCAGCCCCTGCCCAGCAACCAGCTGCTGCAGTTCCTCAAGCATATTATGGGGTCGGGACTTATTACTGAGCTGACAAAATTGAGATGGTCACTGTTTTCGCTTTTTGTAACTTTTTTCCTTAATATTAGGGAATCTGGAGCATAGATGTAGTTAATACTACTTGAGATAGAAAATCATTTTGCCTAATTCGCAATTGTATTTTACTTATTTTAGTGTACATTTTCTTTGTGATTTTCTCTTCATCGGTTAATGCGATTGCCGACCTAAGTAACACTGAGGTCCTCAATGTCACTTTCTCATAATCGCATGTTCAAGTGGAGTTAGCATTTTAAATTGTTTGGAAAATATCTCCCGGTTTGCTAAGTATAGACGGGGTACTTACTTTGGAGGTTATTGTCGAGTTCACAGGGAAGTCCACAATATGATCCCATGACGTTAGTGGTCTCTGCAAATAGGATTTCGAAGCTCATGCTAGTCAAGATAGTTTGTCTTATTAGAAGTGAAAATTACAATATATCTTTGTAACTTATATATAATTAAGATGACTTTAAT 3533 0.4257 MGDSEPVVTEASAAEAYASAVYADTGSNPVPDAGPPVDQSAGEAVQVSSTYGFGYSNVGDANAYAGDPNSVLQQAQFSATVDSKPAGGVADANEASAVVASTAAESTMISDYNSSGNGGVVGVVANAAGLENGNALENLDGSADFTAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARLGSIDKVVEVYERAVQGVTYSVDMWLHYCIFAISTYGDLDTVRRMRATVISPLYGGKALMGLHARIFSILIFLVFSLVGMVALFIFDTLRCINLQIAAEKISLFERGLAYVGTDYLSFPLWDKYIEYEYMQQDWARLAVIYTRILENPNQQLDRYFSSFKELAGNRPLSELRTADEAAAVAGVASEATGQATEGEIHADGTEPSPKSVSAGLTEADELEKYIAIREEMYKKAKEFDSKIISFETAIRRPYFHVRPLNVGELENWHNYLDFIEREGDLSKVSCYLPNHLSQARRVPPFIFEGPLYPTEESSITILRHCLIVKLYERCVIACANYPEYWIRYVLCMEASGSMDLANNVLARATQVFVKRQPEIHLFCARFKEQTGDIDGARAAYQLVHTETSPGLLEAIIRHANMEYRLGKLEDAFSLYEQAIAIEKGKEHSQTLPMLFAQYSRFVYLASGNAEKARQILVEGLENVFLSKPLLEALLHFEAIQPLPKRVDIDFLESSVIKFIMPNSESPGVASPTEREELSSIFLEFLNLFGDVQSIKRAEDRHAKLFLPHRSMSELKKRHAEDFLASDKTKMLRSYSIQSPAQSVMGAYPNAQNPWTNYGVQPQTWPPVTQAQGQQWTAGYSQQASYGAYAGYGGNYANSQLPTSVPQNTAYGAYPPAYPAQPAVPQQNYPQAAAAPAQQPAAAVPQAYYGVGTYY 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01379 899 Gene3D Tetratricopeptide repeat domain 448 791 IPR011990 GO:0005515
Pste5g01379 899 SUPERFAMILY TPR-like 415 754 IPR011990 GO:0005515
Pste5g01379 899 SUPERFAMILY TPR-like 144 237 IPR011990 GO:0005515
Pste5g01379 899 SMART hat_new_1 161 193 IPR003107 GO:0006396
Pste5g01379 899 SMART hat_new_1 195 227 IPR003107 GO:0006396
Pste5g01379 899 SMART hat_new_1 325 358 IPR003107 GO:0006396
Pste5g01379 899 SMART hat_new_1 507 539 IPR003107 GO:0006396
Pste5g01379 899 SMART hat_new_1 611 646 IPR003107 GO:0006396
Pste5g01379 899 SMART hat_new_1 288 323 IPR003107 GO:0006396
Pste5g01379 899 SMART hat_new_1 652 684 IPR003107 GO:0006396
Pste5g01379 899 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 507 778 - -
Pste5g01379 899 MobiDBLite consensus disorder prediction 379 403 - -
Pste5g01379 899 Gene3D Tetratricopeptide repeat domain 140 359 IPR011990 GO:0005515
Pste5g01379 899 SUPERFAMILY TPR-like 295 356 IPR011990 GO:0005515
Pste5g01379 899 PANTHER PRE-MRNA PROCESSING PROTEIN PRP39-RELATED 140 881 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01379 Pste-Chr5 8890601 8905523 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01379 5 8890601 8905523 Pste5g01379 5 8890601 8905523 ECH