Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01378 ATGGAGGCACTTCAAGTGACAAGTGGATTATTGCTCACTTGCTTGCATATAAAAAGAATAGCACTGAAAAACAAAAACCTCACAAGCAAGTCCCAAATGGGTATGGGTATACACAAGAGAAAGCACCACCCGCTCCTCTTTCTCCTTGTTCTAACAACAACCTCAGCTGCAGATAACACAAACTTGATCTACAAAGGTTGCGCGGACCAGAAACTAGAAGTCCAATATTCTCAGAACCTTAAGCCGCTGTTAGATTCCCTGGTGTCGGAGTCGGCACAAAAGGGTTTCGGCGCGACTACGTCCAACGCGCTGACCGGCGCGTACCAATGCAGAGGGGACCTCTCGAACTCCGAGTGCTACAGCTGCGTGAGCAAGATTCCGGGTATGATGGAGCGCCTGTGCAGCGGCGACGTGGCGGCGGCGCGGGTCCAGCTGAGTGGGTGCTACATGCGGTACGAGGTTGTCGGGTTCAAGCAGGTGGCGGCGACGCAGCTGCTGTACAAGGTTTGTGGAGCTCGGAAGGTGGTTGACGGTGGTGGGTTCGAGGCGAGGAGGGAGTCGGCGTTTGAAATGGTCGAAAACGGTGTGCAGAGCAGTGGAAACTTGTTCTACACAGGGAGTTACCAGAGTCTGTATGTGTTGGGTCAGTGCGAGGGTGGTTTGGGAAATGTAGATTGTGGAGCCTGTATCAAGAGTGCTGTTCAACAGGCTACTGATCACTGTGGTTACTCTATTTCTGCGCAGATTTATCTCCAGAATTGTTATATTAGTTATAGCTTTTACCCCAACGGAGTTCCCACCGCCTCCTCTTCTTCAGGGGGAGGTGGGCATCAACACACCGAGAGAACAGTGGCGCTTGCGGTGGGAGGGGTGGCAGCTCTGGGGTTCTTGATTGTTTGTTTGTTATTCCTCAAGTCCGTGTTGAAAAGAAGAGGTGGTGGCAAGCGTTGATCCTCATTCCGATGCCTGTATATACCTTGGGATTTGTCATTCACTTTTTAACATCTTATGTGAATATACCTTTGCCTTTGTATAGTTCTCATGTGTGGACTGTGGTATGAATCGGAGAAAGTATACAACAAAAGTTTATTGGGTATTGGCCTATAGATCTGTGTCCCCACTATATCACTCTCTCAATGAGATAACCCCTTTTATTTTTCCCCTCAAACTCACTCCACTTGTTGCTTTACTTCCCCAATTCACCATTGCCATGCATATCCTCT 1223 0.4914 MEALQVTSGLLLTCLHIKRIALKNKNLTSKSQMGMGIHKRKHHPLLFLLVLTTTSAADNTNLIYKGCADQKLEVQYSQNLKPLLDSLVSESAQKGFGATTSNALTGAYQCRGDLSNSECYSCVSKIPGMMERLCSGDVAAARVQLSGCYMRYEVVGFKQVAATQLLYKVCGARKVVDGGGFEARRESAFEMVENGVQSSGNLFYTGSYQSLYVLGQCEGGLGNVDCGACIKSAVQQATDHCGYSISAQIYLQNCYISYSFYPNGVPTASSSSGGGGHQHTERTVALAVGGVAALGFLIVCLLFLKSVLKRRGGGKR 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01378 316 Gene3D - 161 262 IPR038408 -
Pste5g01378 316 Gene3D - 59 157 IPR038408 -
Pste5g01378 316 ProSiteProfiles Gnk2-homologous domain profile. 58 157 IPR002902 -
Pste5g01378 316 Pfam Salt stress response/antifungal 73 153 IPR002902 -
Pste5g01378 316 Pfam Salt stress response/antifungal 180 260 IPR002902 -
Pste5g01378 316 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 48 307 - -
Pste5g01378 316 FunFam cysteine-rich repeat secretory protein 3 163 262 - -
Pste5g01378 316 ProSiteProfiles Gnk2-homologous domain profile. 163 263 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01378 Pste-Chr5 8872846 8874420 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01378 43 259 Receptor kinase-like Gene Family AT5G40380 24.889 9.56e-10 57.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01378 5 8872846 8874420 Pste5g01378 5 8872846 8874420 ECH