Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01340 GTGCAATGCTTCTGGTTTACACTTTTCCAATCTTGTTCATAGCTGTTTTGGGATGTGTCTACATCCACACAGCCAAAAAAGAAAACCGTTTCAGCATGGAAAGGTACAATAGCAAGAAACGTGAAGTACAATCCATATGGAAGCGTTTGGTGTTTGTGAGAAGCCCTCTTGGCATAGTTTCTGTCACAGAACTTGCCTTCTTGTTTATGTTCATTGTTCTCCTGGTTTGTTCCTTTTCAATTTATCTGTACAATGGCTTTGCCAAAATCAACCATAACTCAGCAGCAGAACACGGTGTAAAAGTGTGGGAGAAGAAACTAGATGGTGCAGCTGTGAGATTGGCCCTCGTTGGGAATATAAGTTTGGCATTCCTTTTTTTCCGGGTTGCTCGCGGCTCCTCAGTGCTACCACTGCTTGGACTCATACCAGAGAGTTGCATCAAATACCATGTTTGGCTAGGACATGTAGCCATGACCCTTTTCACTGCTCATGGTATTTGTTTCATCCTCCATTGGGCTGTTACTCATCAACTTTCAAAAGTTAATCAACATCCTTACTACTATCTCTCTCTCTTAATTGAATCACGTCACATACACACATGTCTCAAACCTTTACTGCAAGCCCTTTTGATAGTTGTTGTATATTATTGGTATTTTTTATCTTGGGGCAATGATTTTATGCTAGAATGGAAGAGAATTGGGATAGCAAATGTAGCTGGAGAGGTAGCTTTGCTTTCTGGTTTGTTGATGTGGATTACAACCATCCCTCGAATTAGGCGACAAGTTTTTGAGCTCTTCTTCTACACTCACTACCTCTACATCCTCTTCATTGTCTTCTTCATCTTTCACGTCGACTTCTTTTATGCATGCACCATGCTCCCTGGTTTCTACCTCTTCTTAGTTGATCGTTACCTAAGGTTTTTGCAATCAAGATGCCGAGTTCCTTTGATTTCTGCTCGTTTGACTTATAATCCCACTAGTACTATGTTCATAAATGTACCAAGTATATCCAAGCTACAGTGGCATCCTTTTACTATTACTTCTAATAGTAATTTGGAACCAAAAACTATGAGTGTTGTCATCAAAGGTGAAGGAACTTGGTCCAAGAAGCTTTGCCAGATGCTTTCAAACCCTTCTGCAATAGATCATATTAATGTCTCTGTTGAAGGTCCTTATGGACCTGCATCAACCAATTATCTAAGGTATGACACTCTAGTGATGATTAGTGGAGGGAGTGGAATCACGCCGTTTATCTCCATCATACGGGAGCTAATATATTTGAGCACAACATTCAGATATAGAAACCCAAAAGTAATACTAATTTGTGCATTGAAGAACTCTTCCTATTTATCAATGCTGGACCTGATCCTTCCAAATTCTAGCACCCCCTATGATATTTCTAACATGCAACTACAAATTAAGGCCTACATTACAAGAAAGGAAGAACATAAATTGGAAAGCCAAATTCACCTTCAACAAATATGGTTCAAGCCCAATGCTACAGATGCACCCGTTTGTGCTATTTTAGGTCCAAACAGTTGGCTTTGGCTTTGTGCTATAATCTCATCCTCGTTCATAGTTTTTCTAATCTTAATTGGGATCATTTCTCGATACATCATTTTCCCTGTTGACCATAATTCTAATAAAATATTTTCACAACCGTTGAGGTCATTCTTCAATATGTTTGCAATATGTGTGTCCATAGCAATGGCTGCTGGTGCAGCTGTTCTTTGGAACAAGAAATACAAAGAAAAAGAAGCAAAGCGGATTCAGAACTTAGAAGGATCATCAGCAGAATCACCAAAGTTGAATATTGATGAAGGATATAAAGAACTGGAAAGCCCTCGACACCAATCCCTTGTTCAAGCGACAAAGGTGCATTATGGTGTAAGACCTGATCTAAGAAGACTGCTATTTGAATTTAAAGGGTCAAGAGTGGGAGATTTTGTTTCTGGACCCAAGAAAATGAGGCAGGAGGTTGCAGAGATTTGCTCATCTGAAGTAGCAAAAAATCTGCATTTTGAGTCCTATAGCTTTAAC 2039 0.3943 MLLVYTFPILFIAVLGCVYIHTAKKENRFSMERYNSKKREVQSIWKRLVFVRSPLGIVSVTELAFLFMFIVLLVCSFSIYLYNGFAKINHNSAAEHGVKVWEKKLDGAAVRLALVGNISLAFLFFRVARGSSVLPLLGLIPESCIKYHVWLGHVAMTLFTAHGICFILHWAVTHQLSKVNQHPYYYLSLLIESRHIHTCLKPLLQALLIVVVYYWYFLSWGNDFMLEWKRIGIANVAGEVALLSGLLMWITTIPRIRRQVFELFFYTHYLYILFIVFFIFHVDFFYACTMLPGFYLFLVDRYLRFLQSRCRVPLISARLTYNPTSTMFINVPSISKLQWHPFTITSNSNLEPKTMSVVIKGEGTWSKKLCQMLSNPSAIDHINVSVEGPYGPASTNYLRYDTLVMISGGSGITPFISIIRELIYLSTTFRYRNPKVILICALKNSSYLSMLDLILPNSSTPYDISNMQLQIKAYITRKEEHKLESQIHLQQIWFKPNATDAPVCAILGPNSWLWLCAIISSSFIVFLILIGIISRYIIFPVDHNSNKIFSQPLRSFFNMFAICVSIAMAAGAAVLWNKKYKEKEAKRIQNLEGSSAESPKLNIDEGYKELESPRHQSLVQATKVHYGVRPDLRRLLFEFKGSRVGDFVSGPKKMRQEVAEICSSEVAKNLHFESYSFN 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01340 678 FunFam Ferric reduction oxidase 3 389 506 - -
Pste5g01340 678 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 229 396 IPR017927 GO:0016491
Pste5g01340 678 Pfam FAD-binding domain 317 394 IPR013112 GO:0016491
Pste5g01340 678 Gene3D - 384 505 IPR039261 -
Pste5g01340 678 SFLD Ferric reductase subgroup (FRE) 211 677 - -
Pste5g01340 678 Coils Coil 464 484 - -
Pste5g01340 678 Pfam Ferric reductase like transmembrane component 115 278 IPR013130 -
Pste5g01340 678 SFLD Ferric Reductase Domain 211 677 - -
Pste5g01340 678 PANTHER NADPH OXIDASE 3 677 - -
Pste5g01340 678 Pfam Ferric reductase NAD binding domain 400 663 IPR013121 GO:0016491
Pste5g01340 678 CDD NOX_Duox_like_FAD_NADP 315 477 - -
Pste5g01340 678 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 384 456 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01340 Pste-Chr5 8658885 8662599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01340 2 678 Miscellaneous Gene Families AT1G01580 48.784 0.0 650
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01340 5 8658885 8662599 Pste5g01340 5 8658885 8662599 ECH
Pste5g01340 5 8658885 8662599 Pste6g02027 6 9482457 9485113 PCT