Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01249 ATTTCCTCTTTGCGTGCCGTACGTGTCATAATGGAGAGGTTGAAGTGGGCTCAATTGGGAGAGAGGCTGAAGACAGGTGGGGCCCAGATGGGCCGAATGGTGAGCGGCAAGGTGAAGGAGATCCTGCAGGCCCCGACGCCGGAGTCCAAGATGGTCGACGAGGCCACCCTGGAGACCATGGAGGAGCCCAATTGGGGCATGAATCTCAGAATCTGCGGCATGATCAACAGCGACCAGTTCAACGGCTCCGAGGTCGTTAAGGCCATCAAGAGGAAAATCAATCACAAGAGCCCCCTCGTTCAGACCCTCAGCCTCGACCTCTTGGAAGCCTGTGCCATGAATTGCGATAAGGTTTTCTCCGAAATCGCCTCCGAGAAGCTTCTTGATGATATGGTTCGCTTGATTCATAACCCCCAGACCCAACACCCCACCAGAACACGGGCTTTCCAGTTGATTCGGGCCTGGGGCCAATCCGATGATCTCGCCTATCTCCCCGTCTTTCGTCAAACTTATATGAGTTTGAAAGGAAGGGAGGAAGCGCTTGACATGGTGGGAGGAAATTCACCACCTGTTCCGTATGCTTCGGAGTCATATGCAAATCAATATCCTGTTGATGCCTCTGAAAGATACCCAATTCCTTTAGCTGACCTACATGATGTGGGTGATCCAGCAGCTTTCTCTTCTAATTACCAACACATATCAGTTGAGGAGAAGAAAGAGCATCTTGTGGTTGCACGAAACAGTCTTGAATTGCTCTCTAGCATTTTAAATTCCGAGACAGAGTCAAAACCTTTGAAGGAAGATTTAACTATGAGCTTGTTGGACAAGTGCAAGCAATCACTCTCTATCATACAGGGGATCGTGGAAAGCACTATAAATGACGAAGCAACACTTTTTGAGGCTTTATATGTCAATGATGAGCTGAGGCAAGTTGTTTCTAAATATGAGGAGTTAGAAGCTGCTCAAAGTTCTGGGGCACAACTACCTCAGAATGATGACAGTGCCAAGCATGATGCCGAAGCTGTTGAAAATCCCAATGAAGTACTCAAAAGTGATGAATCTGAAGCTGTTGAGAATCTGAATGGAAAGCTGCCCCTAAAATCTCTCACTCTTGAGGTCAATGCAGCTGAATGTGATGCTCTTGCTGAAACTAAAACAGTGGATGGTATAAAAGGGAAGGATGCTGAATCTAGCTTCAAGCGAGATACCTTTTATATAATGTTAATGTGGTTCGCACATTTTGATCCACTTCCTTATATATTAATGCCAGAAGAGGTTGAAGACTTAGGAGAGTGGACTGTGGTGTGGAGAGTGGAGCCAACTAATTGCGCAGATGGCAATAAGCTAATATCTGGCCCACCAGATGCATTGGCATTTGGCAGTAATTTATAG 1392 0.467 ISSLRAVRVIMERLKWAQLGERLKTGGAQMGRMVSGKVKEILQAPTPESKMVDEATLETMEEPNWGMNLRICGMINSDQFNGSEVVKAIKRKINHKSPLVQTLSLDLLEACAMNCDKVFSEIASEKLLDDMVRLIHNPQTQHPTRTRAFQLIRAWGQSDDLAYLPVFRQTYMSLKGREEALDMVGGNSPPVPYASESYANQYPVDASERYPIPLADLHDVGDPAAFSSNYQHISVEEKKEHLVVARNSLELLSSILNSETESKPLKEDLTMSLLDKCKQSLSIIQGIVESTINDEATLFEALYVNDELRQVVSKYEELEAAQSSGAQLPQNDDSAKHDAEAVENPNEVLKSDESEAVENLNGKLPLKSLTLEVNAAECDALAETKTVDGIKGKDAESSFKRDTFYIMLMWFAHFDPLPYILMPEEVEDLGEWTVVWRVEPTNCADGNKLISGPPDALAFGSNL 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01249 463 Pfam VHS domain 49 158 IPR002014 GO:0035091|GO:0043130
Pste5g01249 463 CDD VHS 49 175 - -
Pste5g01249 463 ProSiteProfiles GAT domain profile. 233 320 IPR004152 GO:0035091|GO:0043130
Pste5g01249 463 SUPERFAMILY GAT-like domain 229 319 - -
Pste5g01249 463 Gene3D - 235 330 IPR038425 -
Pste5g01249 463 ProSiteProfiles VHS domain profile. 55 182 IPR002014 GO:0035091|GO:0043130
Pste5g01249 463 SMART VHS_2 48 178 IPR002014 GO:0035091|GO:0043130
Pste5g01249 463 Gene3D - 40 190 IPR008942 -
Pste5g01249 463 MobiDBLite consensus disorder prediction 322 347 - -
Pste5g01249 463 PANTHER TOM1-LIKE PROTEIN 1 10 357 IPR044836 GO:0035091|GO:0043130|GO:0043328
Pste5g01249 463 MobiDBLite consensus disorder prediction 333 347 - -
Pste5g01249 463 SUPERFAMILY ENTH/VHS domain 45 177 IPR008942 -
Pste5g01249 463 Pfam GAT domain 246 319 IPR004152 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01249 Pste-Chr5 8075220 8077656 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01249 5 8075220 8077656 Pste5g01249 5 8075220 8077656 ECH