Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01217 ATGGGGCACTGTTTATGGCACCTTTTCACCCTCCTCTGTGTGATTCTTGTGTACGCAACCCCTTCTCTCTCAATTGATGTTCACCGACAAGATAAAACTTCACTTACATCGTTCAAGCAATGGGTGCAAGACCCCAACCGGAGTTTGTCCAGCTGGGGAGGTTCCAACTGCACTTCATGGAGTGGAATCACCTGTGACAACACAACTGGGAGGGTCCTTTCCATCAACCTAACTAGAATGAACTTGTCAGGCCAAATCCACCCTAGTTTGTGCCACCTTTCATCCCTCAACAAGATTGCCTTGTCCCACAACAACTTCACCTCCCCTCTTCCTGAATGTTTTGGCAACCTGCTTAACCTAAGAGCCATTGATCTCAGCCACAACAGGTTTCATGGGGACATCCCTGACTCTTTCATGAGTCTCAGGCACCTCATTGAGCTTGTTTTGAGTGGGAACGCTGGTTTGGGGGGTCCTCTGCCTGCTTGGATTGGTAACTTCTCTACAAATCTGGAAAGCCTCCATCTTGGTTTTTGTTCATTCACTGGGGGCATACCTCAGAGTTTGCTTTACCTCAAGTCCCTCAAGTATTTGGACCTTGAGAACAATCTCTTGTCCGGTAATCTGGTTGATTTTCAACAGCCTTTGGTTTTGCTCAATCTTGCATCCAATCAATTTGCTGGTACTTTGCCTTGTTTTGCAGCTTCACTTCACTCTCTGACTGTGTTGAATTTGTCTAACAATTCTATCGTGGGGGCACTACCTGCTTGTATTGCTTCCTTTCAAGCTCTTACTCATTTGAACCTGTCAGGGAATCACTTGAAGTATAGGATATATCCTAGACTTGTGTTCTCAGAGAAACTTCTGGTTTTGGACTTGAGTAACAATGCTTTGTCTGGTCCTATTCCCAGTAAAATTGCGGAAACTACTGAGAAACTTGGTCTTGTTCTTCTTGACCTTTCTCACAATCAGTTCTTTGGTGAAATTCCTGTGAAAATCACTGAGTTGAAAAGCTTGCAGGCCTTATTCCTTTCTCACAATCTTCTCTCTGGTGAGATTCCTGCTAGAATTGGAAATTTGACTTATCTTCAGGTCATTGATCTCTCACACAACTCTTTGTCTGGTACCATTCCATTCAGTATAGTTGGGTGCTTTCAGCTGTATGCTCTAATCCTTAACAATAACAATCTTTCTGGTGTAATTCAACCGGAGTTTGATGCATTGGATATCTTGAGGATACTGGATATAAGCAACAATAGATTTTCCGGGGCCATCCCACTCACTTTGGCTGGATGCAAATCTCTGGAGATTGTTGATTTTAGTTCCAATGAGCTTTCTGGATCCTTGAATGATGCAATAACCAAATGGTCAAACCTCAGGTATCTGTCTCTTGCTCAGAACCAGTTCAGTGGAACTTTGCCTAGTTGGTTGTTCACATTTGATGCAATAGAAGCGATGGATTTCTCGCATAACAAGTTTTCTGGCTTCATACCTGATATTAATTTTAAGGGTAGCTTAATATTGAACCCAGGGAATGACACTGTTAAAGAGCCATTGGTTGCAGCAAGAAAGGTTCAACTGAGAGTTTCGGCGGTTGTCTCTGATAGCAATCAACTCAGTTTCACTTACGATCTTTCCTCAATGGTTGGAATCGATCTATCCAGCAACTTGCTTCATGGGGAAATTCCAAAGGGCTTATTTGGTCTAGCTGGCCTAGAATATCTGAACTTGTCATGCAACTTTCTCCACGGACAACTTCCAGGATTGCAGAAAATGCAGAGTTTAAAAGCCTTAGATTTGTCACATAATTCCTTGTCAGGACATATCCCAGGAAACATTTCTAGCCTTCAAGATCTATCCATTTTGAATCTATCCTACAATTGCTTTTCTGGATACGTTACTCGGAAGCAAGGGTATGGAAGATTTCCTGGCGCATTTGCTGGAAATCCGGATCTGTGCATGGAAGCTTCCAGTGGAGAATGTGATGATGGTAGGACTCAATCTGCACAAGGAAGTTCTTTCAGGGAAGACAGGATGGATGACCCAATTTCTGTGGGAATTTTCTTTATCAGTGCCTTTGTTAGTTTTGATTTTGGTGTTGTTGTCCTCTTTTGTTCTGCACGAGCAAGAAATTACATTCTCCAAACAATGGAAGGAATACTATCTGGCCATCAACTTCAAGAGTGTTCTCTCATGATTACTGAACAAACGTGTCTCAGAATTACAGGATCAAATGTCATGATACCAGTTACCAAAGACGGTGATGGTAAACAAATTGTTCCTAGTAAAGACGAGTCCCTCATCATTCTAATGGTTATTTTGTTTTGCTGGATCTTGGTTGCAACAAGTCTAGAAACATCACCACAGCCATTATTCATTATTCAGTGGGGTGAAGGGTCAGCAGCAGGGAACAAATCTGATATGTGGTCTAGTTATGGTGAAATTTTGATCTTGCGCATCAAATTGTAG 2466 0.4234 MGHCLWHLFTLLCVILVYATPSLSIDVHRQDKTSLTSFKQWVQDPNRSLSSWGGSNCTSWSGITCDNTTGRVLSINLTRMNLSGQIHPSLCHLSSLNKIALSHNNFTSPLPECFGNLLNLRAIDLSHNRFHGDIPDSFMSLRHLIELVLSGNAGLGGPLPAWIGNFSTNLESLHLGFCSFTGGIPQSLLYLKSLKYLDLENNLLSGNLVDFQQPLVLLNLASNQFAGTLPCFAASLHSLTVLNLSNNSIVGALPACIASFQALTHLNLSGNHLKYRIYPRLVFSEKLLVLDLSNNALSGPIPSKIAETTEKLGLVLLDLSHNQFFGEIPVKITELKSLQALFLSHNLLSGEIPARIGNLTYLQVIDLSHNSLSGTIPFSIVGCFQLYALILNNNNLSGVIQPEFDALDILRILDISNNRFSGAIPLTLAGCKSLEIVDFSSNELSGSLNDAITKWSNLRYLSLAQNQFSGTLPSWLFTFDAIEAMDFSHNKFSGFIPDINFKGSLILNPGNDTVKEPLVAARKVQLRVSAVVSDSNQLSFTYDLSSMVGIDLSSNLLHGEIPKGLFGLAGLEYLNLSCNFLHGQLPGLQKMQSLKALDLSHNSLSGHIPGNISSLQDLSILNLSYNCFSGYVTRKQGYGRFPGAFAGNPDLCMEASSGECDDGRTQSAQGSSFREDRMDDPISVGIFFISAFVSFDFGVVVLFCSARARNYILQTMEGILSGHQLQECSLMITEQTCLRITGSNVMIPVTKDGDGKQIVPSKDESLIILMVILFCWILVATSLETSPQPLFIIQWGEGSAAGNKSDMWSSYGEILILRIKL 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01217 821 SMART LRR_typ_2 407 430 IPR003591 -
Pste5g01217 821 SMART LRR_typ_2 335 359 IPR003591 -
Pste5g01217 821 SMART LRR_typ_2 455 479 IPR003591 -
Pste5g01217 821 SMART LRR_typ_2 591 615 IPR003591 -
Pste5g01217 821 SMART LRR_typ_2 260 285 IPR003591 -
Pste5g01217 821 SMART LRR_typ_2 117 140 IPR003591 -
Pste5g01217 821 SMART LRR_typ_2 544 568 IPR003591 -
Pste5g01217 821 SMART LRR_typ_2 236 259 IPR003591 -
Pste5g01217 821 SMART LRR_typ_2 191 213 IPR003591 -
Pste5g01217 821 SMART LRR_typ_2 93 116 IPR003591 -
Pste5g01217 821 Pfam Leucine Rich Repeat 593 615 IPR001611 GO:0005515
Pste5g01217 821 Pfam Leucine Rich Repeat 169 189 IPR001611 GO:0005515
Pste5g01217 821 Gene3D Ribonuclease Inhibitor 542 652 IPR032675 -
Pste5g01217 821 SUPERFAMILY RNI-like 218 631 - -
Pste5g01217 821 FunFam LRR receptor-like serine/threonine-protein kinase EFR 28 309 - -
Pste5g01217 821 ProSiteProfiles Leucine-rich repeat profile. 593 615 IPR001611 GO:0005515
Pste5g01217 821 SUPERFAMILY L domain-like 29 303 - -
Pste5g01217 821 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 312 508 - -
Pste5g01217 821 FunFam Leucine-rich repeat receptor protein kinase EMS1 539 635 - -
Pste5g01217 821 Gene3D Ribonuclease Inhibitor 212 499 IPR032675 -
Pste5g01217 821 PANTHER UNNAMED PRODUCT 286 709 - -
Pste5g01217 821 Gene3D Ribonuclease Inhibitor 30 138 IPR032675 -
Pste5g01217 821 PRINTS Leucine-rich repeat signature 362 375 - -
Pste5g01217 821 PRINTS Leucine-rich repeat signature 591 604 - -
Pste5g01217 821 Pfam Leucine rich repeat 95 152 IPR001611 GO:0005515
Pste5g01217 821 Pfam Leucine rich repeat 215 273 IPR001611 GO:0005515
Pste5g01217 821 Pfam Leucine rich repeat 385 444 IPR001611 GO:0005515
Pste5g01217 821 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
Pste5g01217 821 Gene3D Ribonuclease Inhibitor 139 211 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01217 552 637 Receptor kinase-like Gene Family AT1G75640 38.372 8.66e-09 57.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01217 5 7923920 7926579 Pste5g01217 5 7923920 7926579 ECH