Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01168 GAAGTTCCCTCTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTAAGCCCGCGTTTACAAAGCCGCTTTCATTTATCTCGTCTTTGTTTGTTTCCTCCCCTTTCCCTCTTCTTTGTTTCATTCACCGACCCTTTTCTCTATCTGGGTCGGCAATGGCTCTTAATTAGTCTTTGTTTCTGTTTCGTTCTTCGCCGTTGCTTTCTCTCGAAGCTAACCCGAAATGGATCTCAGAGAAAGATTGGTGCTTTTTCTTGTGGGGCTGTTCCTTTTGCTTGTGCAGCTTTCTTCCCTTGCCCGTGCGAATTTGGTGTTCCCTGTTGAGCGCAAATTCAAAGGTCCTGTTCATAACCTTACTGCAATCAAAGATCATGATGCTCTTCGCCGAGGTAGATTTCTCTCTGTCGTTGATGTCCCTCTTGGAGGCAATGGCCATGCTACTTCAACTGGCCTTTATTACACCAGAATTGGGCTTGGCTCTCCTGCAAAGGACTACTATGTCCAAGTTGATACAGGAAGTGACATTCTCTGGATCAACTGTGCTGGCTGCACAACATGTCCCAAGAAAAGTGGTCTTGGTATGGACTTAACCCTCTTTGATCCTGACGAGTCCAAAACTTCAAAATTGGTTCCTTGTGACGACGAATTTTGCACTACCACGTATGATGGTCCAATTTCTGGCTGCACAAGAGACATGTCCTGCCCGTACAGCATAACTTATGGAGATGGAAGTACGACCACAGGGTCCTATATTAAGGATTATCTTACATTTAACCGAGTCAATGGTGATCTCCAAACTGTACCAGATAATAGCAGTGTGATTTTTGGGTGTGGATCTAAACAATCTGGGACTTTGAGTTCAACTACTGAAGAATCCCTTGATGGAATAATTGGTTTTGGACAAGCAAATTCTTCTGTGCTTTCGCAGCTTGCTGCAGCTGGAAAGGTGAAAAGGGTATTTTCGCACTGCCTTGACAGTATTAAGGCTGGAGGAATATTTGCCTTTGGGGAAGTGGTGCAGCCAAAATATAAGACAACTCCATTGGTACCAGGAATGGCACACTACAATGTGGTTTTGAAGGACATGGAGGTCGGTGGGGACCCTATACAGCTCCCAACAGATATATTTGATTCTTCAAGTGGGAGGGGAACAATAATAGATAGTGGTACAACCTTGGCTTACCTTCCAGCCTCAATTTATGACCAGATATTGGAAAAGGTTTTGGGTCAGCAAGTTGGACTAAAATTATATCTTGTCGAGGATCAATTTACTTGTTTCCGTTTTTCTAAGACAAGTGTTGATGATGGATTTCCAGCTGTCAAGTTTATATTTGAGGAGGGGCTTACTCTGATAGCTTATCCTCACGATTACCTATTCCAGTTTAAAGAAGACATGTGGTGTGTAGGCTGGCAAAAAAGTGCAGCACAAACTAGGGATGGAAAGGACCTAATTCTTCTTGGAGATTTGGTGCTGACAAACAGATTAGTCGTGTATGATCTTGATAATATGACCATTGGATGGACTAATTACAATTGTTCTTCTAGCATCAAAGTGAAGGATGATAAGAGTGGATCTGTATATACAGTGGGCGCACACGATATCGGTTCAGCTTCTACCGTGTTAATTGGAAAAATATTAACGTTCTTTGTGTTGCTTATTACCATACTAAGCACTTAAACTGAAAGTGTCATTATATCGAGAGATGCCATATTTATTCATTTTTTGTAACATAATTTCTTCAATGGTGAGCTTAATGCAAATATATTAACCATTTCTCGTCTATAGAAGTGGGAG 1796 0.4193 MDLRERLVLFLVGLFLLLVQLSSLARANLVFPVERKFKGPVHNLTAIKDHDALRRGRFLSVVDVPLGGNGHATSTGLYYTRIGLGSPAKDYYVQVDTGSDILWINCAGCTTCPKKSGLGMDLTLFDPDESKTSKLVPCDDEFCTTTYDGPISGCTRDMSCPYSITYGDGSTTTGSYIKDYLTFNRVNGDLQTVPDNSSVIFGCGSKQSGTLSSTTEESLDGIIGFGQANSSVLSQLAAAGKVKRVFSHCLDSIKAGGIFAFGEVVQPKYKTTPLVPGMAHYNVVLKDMEVGGDPIQLPTDIFDSSSGRGTIIDSGTTLAYLPASIYDQILEKVLGQQVGLKLYLVEDQFTCFRFSKTSVDDGFPAVKFIFEEGLTLIAYPHDYLFQFKEDMWCVGWQKSAAQTRDGKDLILLGDLVLTNRLVVYDLDNMTIGWTNYNCSSSIKVKDDKSGSVYTVGAHDIGSASTVLIGKILTFFVLLITILST 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01168 484 ProSiteProfiles Peptidase family A1 domain profile. 78 434 IPR033121 -
Pste5g01168 484 Gene3D Acid Proteases 64 263 IPR021109 -
Pste5g01168 484 Pfam Xylanase inhibitor C-terminal 280 434 IPR032799 -
Pste5g01168 484 Pfam Xylanase inhibitor N-terminal 78 262 IPR032861 -
Pste5g01168 484 SUPERFAMILY Acid proteases 71 442 IPR021109 -
Pste5g01168 484 PRINTS Pepsin (A1) aspartic protease family signature 410 425 IPR001461 GO:0004190|GO:0006508
Pste5g01168 484 PRINTS Pepsin (A1) aspartic protease family signature 84 104 IPR001461 GO:0004190|GO:0006508
Pste5g01168 484 PRINTS Pepsin (A1) aspartic protease family signature 310 321 IPR001461 GO:0004190|GO:0006508
Pste5g01168 484 PRINTS Pepsin (A1) aspartic protease family signature 257 270 IPR001461 GO:0004190|GO:0006508
Pste5g01168 484 PANTHER ASPARTYL PROTEASES 11 432 IPR001461 GO:0004190|GO:0006508
Pste5g01168 484 FunFam Eukaryotic aspartyl protease family protein 263 445 - -
Pste5g01168 484 Gene3D Acid Proteases 264 444 IPR021109 -
Pste5g01168 484 CDD pepsin_A_like_plant 78 438 IPR034161 -
Pste5g01168 484 FunFam Eukaryotic aspartyl protease family protein 68 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01168 Pste-Chr5 7573851 7580122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01168 60 439 Miscellaneous Gene Families AT1G44130 26.768 4.59e-32 125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01168 5 7573851 7580122 Pste5g01168 5 7573851 7580122 ECH