Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01151 TACGTTCAACTCTGCAATCGGATGTGAGGATTCACACAGAAAGCAAAGTTTGCTTATTCCGCAGTATGGCGGAAAATTCTTTAACTCATCTCAACAAGTTTGTGTTGTTTTGTTTGTTGCTAATTCAAGTTGCGGTTTCGGAAATCATTTTTGAAGAGCGCTTTGATGATGGATGGCGAAGTCGGTGGGTGAAATCAGACTGGAAAAGCAGTGAGGGAAAAGCAGGTTCATTCAAGCACACAGCTGGAAAATGGGCTGGTGATCCAGATGATAAAGGTATTCAAACATCCAGTGATGCCAAACACTTTGCCATCTCTGCAAAAATACCAGAATTGAGCAACAAGAATAGAACATTGGTCATCCAGTATTCTGTGAAATTTGAGCAGGAGATTGAGTGCGGTGGAGGTTACATCAAACTTCTATCGGGATTTGTTAATCAGAAGAAGTTTGGTGGGGATACACCTTATGTTTTTATGTTTGGACCAGATATATGTGGCACGGATACGAAGAAGCTCCATGTGATTCTCTCCTACCACGGTCAAAATTACCCCATAAAGAAAGACCTGCAATGTGAAACTGACAAGTTAACTCATTTCTACACATTCATTCTCAGACCAGATGCCACATACAGTGTCCTGGTTGATAATAGAGAGAGAGATTCTGGAAGCATGTACATAGATTGGGATATTCTTCCTCCACGAAAAATCAAAGATGTCAAGGCCAAAAAGCCTGCAGACTGGGAAGACAGAGAATACATCGAAGACCCTAATGATGTCAAACCCGAGCCTGAGAACTGGGATGAAGAGGAAGATGGGAAATGGAAACCACCAAAGATACCAAATCCAGCATACAAAGGACCATGGAAAAGAAAGAAAATCAAGAACCCTAACTACAAGGGGAAATGGAAAATTCCATGGATAGATAATCCAGAGTTTGAAGATGACCCTGATCTTTATGTGCTTAAGCCTATCAAGTATGTGGGCATTGAAGTTTGGCAGGTTAAAGGCGGTTCAGTTTTTGACAACATTTTGATTTGTGATGATCCTGATTATGCAAAACAAATTGTAGAAGAAGTGTTTGCCAACAGGGAGATTGAAAAGGAAGGTTTTGAGGAAGCAGAGAAAGTGAGAAAAGCCAAAGAGGAGGAGGAGGCTCAAAGAGCAAGAGAAGAAGGTGAAAGGCGAAGGCGAGAGAGAGGTCATGATCGACGATACCGGGATAGATATAGAGACAAATACAGAAGGCATCACCATTACGAGGATTATCACGACGAGCTTTGATGGGATACAACGTCCTTATCAATTATCTGGTTGACAAGAATATCAAGTTATGAATTATAGTTTCGTTGATATTGATGCTATCCCATCTCATGTTAATTTCCAAGGGAAACTTTTAAATAAAAATAGTCTATTTGTCGCATATCAATGTATTATTTTAGTTTTGTCTTCTCTCAGTTCTCATCCATTTAACGTCTAGACTGGAAAACAAAAATGCATTTTGCCATTGCTACGAACAGGGGCGACCCATATATTATTGAGGGTGCTCAAATGCATCCCTCGTACATGTATTTGTATCAAATTTTTATATTTTACACTCCTAATTTAAATTCCTTCACTTATTTTTGGATAAGATAAATAAATACACTCTTTTGTTTTAATA 1659 0.3912 MAENSLTHLNKFVLFCLLLIQVAVSEIIFEERFDDGWRSRWVKSDWKSSEGKAGSFKHTAGKWAGDPDDKGIQTSSDAKHFAISAKIPELSNKNRTLVIQYSVKFEQEIECGGGYIKLLSGFVNQKKFGGDTPYVFMFGPDICGTDTKKLHVILSYHGQNYPIKKDLQCETDKLTHFYTFILRPDATYSVLVDNRERDSGSMYIDWDILPPRKIKDVKAKKPADWEDREYIEDPNDVKPEPENWDEEEDGKWKPPKIPNPAYKGPWKRKKIKNPNYKGKWKIPWIDNPEFEDDPDLYVLKPIKYVGIEVWQVKGGSVFDNILICDDPDYAKQIVEEVFANREIEKEGFEEAEKVRKAKEEEEAQRAREEGERRRRERGHDRRYRDRYRDKYRRHHHYEDYHDEL 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01151 404 PANTHER CALRETICULIN AND CALNEXIN 12 369 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Pste5g01151 404 PIRSF Calreticulin 6 399 IPR009169 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Pste5g01151 404 PRINTS Calreticulin signature 106 124 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Pste5g01151 404 PRINTS Calreticulin signature 304 324 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Pste5g01151 404 PRINTS Calreticulin signature 132 148 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Pste5g01151 404 PRINTS Calreticulin signature 271 290 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Pste5g01151 404 PRINTS Calreticulin signature 221 234 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Pste5g01151 404 MobiDBLite consensus disorder prediction 228 258 - -
Pste5g01151 404 ProSitePatterns Calreticulin family signature 1. 104 119 IPR018124 GO:0005509
Pste5g01151 404 Gene3D - 26 369 - -
Pste5g01151 404 Coils Coil 349 376 - -
Pste5g01151 404 FunFam Calreticulin 1b 26 209 - -
Pste5g01151 404 MobiDBLite consensus disorder prediction 228 254 - -
Pste5g01151 404 MobiDBLite consensus disorder prediction 348 381 - -
Pste5g01151 404 Pfam Calreticulin family 250 323 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Pste5g01151 404 Pfam Calreticulin family 29 248 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Pste5g01151 404 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 224 IPR013320 -
Pste5g01151 404 SUPERFAMILY P-domain of calnexin/calreticulin 207 306 IPR009033 GO:0005509|GO:0005515
Pste5g01151 404 Gene3D Calreticulin/calnexin, P domain 201 296 IPR009033 GO:0005509|GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01151 Pste-Chr5 7503896 7510562 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01151 12 326 Miscellaneous Gene Families AT5G61790 34.271 5.42e-56 191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01151 5 7503896 7510562 Pste5g01151 5 7503896 7510562 ECH