Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01070 ACTATGTCAGGATGATGATTCCTCTGTCCTATAACTCAGTCTCTGTGCACTTGGGAAGAGTACCCTGTGACCTTCTTCCCCTAATCGCGTTGGATTCCGTTCTGCGTAAGCCCTGTTTCTCTGTCTCTCAGTTTTTCAACTGTGGGAGTCAGAGAAGGAGCAAGAAGCAAAACAATTCCATTGTCATGTCTTCTAATAATCTCAGGACCAACAATTTCCTGCGCCACGTTGAATCAATGAGGCTTCACCCATCAGGTGCTGGCCACATTCCTTACTTGAACGCTATCATACTTGGTGAATCTCTCGCCACTGAAGAGGATGATTTCGTTCTTCCAAGTGAGGACTTTGCAAGCCAAGCCAATGTTCAGTCCCCAGAACAGTATCTGAAGTTGTATAAGAGATCGATTGAGGACCCTGATGGATTCTGGTCTGAGATTGCCTCACAGTTTTATTGGAAACAGAGATGGGGTGATAAAGTGTGTGATGAAAATTTTGATATTAGAAATGGGAATATCAAGATTGAGTGGTTCAAGGGTGGCATCACCAACATCTGTTATAATTGCTTGGATAGAAATGTTGAAGCTGGACTTGGTGACAAGGTAGCCATTTACTGGGAAGGCAATGAGCCTAGTTTGGATGCTACTTTGACATACTCTCAACTTCTCGATCAAGTTTGCCAGCTTGCAAACTACCTTAAAGATATTGGTGTGAAAAAGGGAGATGCTGTAATTATTTATTTGCCCATGCTTATGGAACTTCCCATTGCAATGCTTGCCTGTGCTCGGATTGGTGCTGTTCATTCGGTTGTATTTGCTGGTTTTTCTGCAGAAGCCCTTACCCAAAGAATCATTGATTGTAAACCAAAAGTGGTAATCACTTGCAATGCTGTCAAAAGGGGGCCTAAGGCTATCCATCTGAAAGATATTGTTGATACTGCAATCCATGATTCAGCCCAAAATGGGGGGATCTCTATAGATAAATGCCTAGTTTATGAAAACCCATCAGCAATGAAGAAGGAAGATACCAAATGGAAGGAAGGGCGTGATATATGGTGGCAGGATGTCACTCCTCAATATCCAACTACTTGTCCAGTGGAGTGGGTTGATGCAGAGGATCCACTTTTTCTACTTTATACAAGTGGAAGTACAGGAAAGCCTAAGGGTGTCCTCCATACAACTGGTGGTTACATGGTGTACACTGCAACAACATTCAAGTATGCATTTGACTACAAGCCGTCTGACATCTACTGGTGTACAGCTGATTGTGGTTGGATTACTGGGCACAGTTATGTCACTTATGGACCCATGCTCAATGGTGCATCTGTTGTTGTGTTTGAAGGGGTGACAATATTCTACACGGCCCCCACACTGGTGCGGTCCCTCATGCGTGATGGTGATGCGTTTGTTACTCGCTACTCAAGGAAATCTTTACGAGTGCTAGGAAGTGTAGGCGAGCCCATAAATCCAAGTGCATGGAGGTGGTTTTACAATGTAGTTGGAGATTCCAGGTGCCCTATCTCTGACACTTGGTGGCAAACAGAAACGGGTGGCTTCATGATAACTCCATTACCAGGTGCTTGGCCCCAGAAACCTGGTTCTGCAACTTTCCCTTTCTTTGGAGTTCAGAAATCGTGGCCTGGGGCATTCAGAACTCTGTATGGTGATCATGAAAGATATGAAACAACATATTTCAAGCCATTTGCGGGATACTATTTCAGTGGTGATGGTTGCAGCAGGGATAAAGATGGATATCATTGGCTCACTGGAAGAGTTGATGATGTCATCAATGTCAGTGGGCATCGAATTGGCACAGCAGAAGTGGAATCAGCCCTAGTTTCACATCCTCAATGCGCTGAGGCTGCTGTGGTCAAAGGACAGGGTATCTATGCATTTGTTACAGTTGTGGATGGTGTTCCTTACAGTGAACAACTCCGGAAGGACCTCATACTCACTGTTCGAAAGCTGATTGGAGCATTTGCAGCACCTGACAAAATCCATTGGGCACCTGGCCTTCCAAAAACAAGGAGTGGAAAGATAATGAGAAGAATTCTGAGAAAAATTGCCTCCAGGCAGCTGGATGAACTTGGAGATACAAGTACCCTTGCAGATCCAAGTGTGGTCAATCAACTTATAGAACTTGCAGATTCTTGAAGCCCCAAACTTTGTATTATTTGCTTGTAGGGAAATGCTAGTAACACAATTTAGTATTTTTTTAACACATTCTTCATTATTAGTTAAAATTTATTGAAAATTACAAATTTATGGATCATCACTACTTATTTTATGATCCTTACTTGGAATTTTGTAGTTTCTAATAAATTTTAATTGATAATAGAGTGTATTAAAAAATAATCTTGTTAGCCAATGTTGTTAAAAAATAAGTTAAGGAATTTGAGAATGTTTTTCTTGGAATCATATAGGAATACAATTAAGAATCACAGTGAGG 2445 0.42 MMIPLSYNSVSVHLGRVPCDLLPLIALDSVLRKPCFSVSQFFNCGSQRRSKKQNNSIVMSSNNLRTNNFLRHVESMRLHPSGAGHIPYLNAIILGESLATEEDDFVLPSEDFASQANVQSPEQYLKLYKRSIEDPDGFWSEIASQFYWKQRWGDKVCDENFDIRNGNIKIEWFKGGITNICYNCLDRNVEAGLGDKVAIYWEGNEPSLDATLTYSQLLDQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSAEALTQRIIDCKPKVVITCNAVKRGPKAIHLKDIVDTAIHDSAQNGGISIDKCLVYENPSAMKKEDTKWKEGRDIWWQDVTPQYPTTCPVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPSDIYWCTADCGWITGHSYVTYGPMLNGASVVVFEGVTIFYTAPTLVRSLMRDGDAFVTRYSRKSLRVLGSVGEPINPSAWRWFYNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVKGQGIYAFVTVVDGVPYSEQLRKDLILTVRKLIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPSVVNQLIELADS 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01070 712 Pfam AMP-binding enzyme C-terminal domain 602 674 IPR025110 -
Pste5g01070 712 CDD ACS 122 699 - -
Pste5g01070 712 Pfam Acetyl-coenzyme A synthetase N-terminus 124 184 IPR032387 -
Pste5g01070 712 SUPERFAMILY Acetyl-CoA synthetase-like 111 707 - -
Pste5g01070 712 Gene3D - 105 588 IPR042099 -
Pste5g01070 712 PANTHER ACETYL-COENZYME A SYNTHETASE 108 538 - -
Pste5g01070 712 FunFam Acetyl-coenzyme A synthetase 105 540 - -
Pste5g01070 712 Gene3D - 589 712 IPR045851 -
Pste5g01070 712 Pfam AMP-binding enzyme 193 538 IPR000873 -
Pste5g01070 712 ProSitePatterns Putative AMP-binding domain signature. 372 383 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01070 Pste-Chr5 7061963 7070385 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01070 66 711 Acyl Lipid Metabolism Gene Families AT5G36880 76.445 0.0 1103
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01070 5 7061963 7070385 Pste5g01070 5 7061963 7070385 ECH