Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01056 ATGGGCGCGAGCAGCGACCCAACCCAAGACGGTTCCGACGAGCAGCAAAAGCGTTCGGAGATCTACACTTACGAGGCGCCATGGCACATCTACGCCATGAACTGGAGTGTCCGCCGCGACAAGAAGTACCGTTTGGCTATCGCCTCTCTCCTGGAGCAGTACCCGAACCGGGTTGAAATTGTCCAGCTGGATGACTCCAACGGAGAGATCCGGTCCGACCCGAATCTCTCCTTCGAGCATCCCTACCCTCCCACGAAGGCTATTTTCATCCCGGATAAGGACTGCCACCGCCCCGACCTCCTCGCTACCTCGTCGGACTTCCTCCGCGTGTGGCGCATCTCCGAGGCGGACGCGGAGTCGTCGCAGCCCTCGCCACGTGTCGAACTGAAATCGCTTCTCAATGGGAACAAGAACAGCGAGTACTGTGGGCCACTGACCTCGTTCGACTGGAACGAGGCGGAGCCGAGGCGCATCGGCACCTCCAGCATCGACACCACGTGCACTATATGGGACATCGAGAAGGAAACCGTTGATACTCAGTTAATCGCGCATGATAAAGAGGTTTACGACATCGCATGGGGCGGCGTCGGCGTTTTCGCCTCCGTCTCCGCCGACGGCTCCGTTAGAGTTTTCGATCTCCGCGACAAGGAGCACTCCACCATCATCTACGAGAGCTCTGAACCCGATACTCCTCTTGTTCGGCTCGGCTGGAACAAGCAGGACCCGAGGTACATGGCCACCATTATCATGGACAGCGCCAAGGTCGTCGTGTTGGACATTCGCTTCCCCACGCTCCCTGTCGTGGAGCTGCAGCGCCACCAGGCCAGCGTCAACGCCATTGCGTGGGCCCCACATAGCTCCTGCCATATCTGCACCGCCGGAGATGATTCTCAGGCGCTGATTTGGGACCTGTCTTCCATGGGTCAGCCCGTCGAGGGTGGCCTTGACCCCATCCTCGCCTACACTGCCGGCGCCGAGATTGAGCAGCTTCAGTGGAGCTCTTCTCAGCCCGATTGGGTCGCCATTGCCTTTGCAACTAAGCTTCAGATTCTTAGGGTTTGA 1062 0.5904 MGASSDPTQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSNGEIRSDPNLSFEHPYPPTKAIFIPDKDCHRPDLLATSSDFLRVWRISEADAESSQPSPRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEKETVDTQLIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFATKLQILRV 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01056 353 FunFam WD repeat-containing protein LWD1 17 352 - -
Pste5g01056 353 ProSitePatterns Trp-Asp (WD) repeats signature. 290 304 IPR019775 -
Pste5g01056 353 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 270 306 - -
Pste5g01056 353 SMART WD40_4 263 303 IPR001680 GO:0005515
Pste5g01056 353 SMART WD40_4 126 171 IPR001680 GO:0005515
Pste5g01056 353 SMART WD40_4 174 212 IPR001680 GO:0005515
Pste5g01056 353 SMART WD40_4 71 112 IPR001680 GO:0005515
Pste5g01056 353 PANTHER WD REPEAT CONTAINING PROTEIN 12 353 IPR045159 -
Pste5g01056 353 Gene3D - 10 352 IPR015943 GO:0005515
Pste5g01056 353 Pfam WD domain, G-beta repeat 181 212 IPR001680 GO:0005515
Pste5g01056 353 Pfam WD domain, G-beta repeat 270 303 IPR001680 GO:0005515
Pste5g01056 353 SUPERFAMILY WD40 repeat-like 27 309 IPR036322 GO:0005515
Pste5g01056 353 ProSiteProfiles Trp-Asp (WD) repeats profile. 270 306 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01056 Pste-Chr5 6977911 6978972 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01056 5 6977911 6978972 Pste5g01056 5 6977911 6978972 ECH