Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01007 ATGAGGCTTACAGTAAAAACACTACAGCCAGTCCCTTCACCCCAAAGCAACAGCTTCCTAAAACAGCGCTGCATAATAAGTAGGATGATGACCGAAGCATATAAACCAACCAACAAAAAGCTACATCTGTCTAATGACACAGGACAAGCCGCATTGCATTTGGAGAAAATGATAAACTTGGAGGACCATAATAGTAAAAGATTTATTATGAGGATGAAATCATCAAAACTTGGGAAAAGGTGGAAGGAGTACCATGGGATGAGCAATTGGGAGGGTTTGCTAGACCCATTAGACGAGAATTTACGTGCCGAAATCCTACGGTACGGTAATTTCGTTGAAACTGCTTACAAATCCTTCGAGTTTGACCCTTCGTCTCCGAACTATGGAAACTCGAGGTTCCCAAAAAAAACTGTTTTAGAAAGGTGTGGTTTACCTAACACGGGGTACAAGGTAACAAAGTACGTACGGGCAACATCGGGTATTGCGCTACCTAGGTGGGTTGAGAAAGCACCAACATGGGTAGCAAAACAGTCGAGCTATGTTGGATATGTAGCGGTGTGTCACAATAAAGAAGTGATGAAAAGGCTTGGTCGGCGGGATGTTGTGGTGGCATATAGAGGAACAACAACATGCTTGGAATGGTTGGAGAATATTCGTGCATCGCTCACCGACCTCCCTATACCATGCAGCAACTTTGAAAAAAATGGATGTGGGGCCATGGTGGAAAGAGGGTTCTTAAGTCTCTACACTTCCTCACTTCCTGCAAAGACCTCCTCTCTGCAGGAAATGGTGAGGCGAGAGATCTCCAGGATCCTCCAAACCTACCGCGGTGAACAGCTCAGCCTCACCGTCACCGGCCATAGTCTCGGTGCCGCATTGGCCACCCTCACTGCCTATGATGTCAAGACCGCCTTTCCATCCCTTCCCGTCACTGTCATCTCTTTCGGTGGCCCCCGCGTTGGCGACCGCACTTTTCGCCGCCACCTTGAGCGGCAAGGGACCAAGGTTTTGCGCATAGTCAACTCCGACGATCTCATCACCAAGGTTCCTGGCTTTGTTTTTGATGATGACCTCCCCACCACCGGTGCCGCGGGCCTCCACGACCCTCTATTTCCTAGCTGGATTCAGAAGAGGGTCGAGGAGGCCCAGTGGGTCTACGCCGAGGTTGGAAAAGAACTGCGCCTATGTAGCAGGGACTCTCCCTATCTGGGAAACACCAATGTTGCCACTTGTCACGAGCTCAACACTTATATGCACCTCGTTGATGGCTTTGTCAGCTCCACCTGTCCCTTCCGAGCCTCCGCCAAGAGGTTCCTCCGCCAATGA 1326 0.497 MRLTVKTLQPVPSPQSNSFLKQRCIISRMMTEAYKPTNKKLHLSNDTGQAALHLEKMINLEDHNSKRFIMRMKSSKLGKRWKEYHGMSNWEGLLDPLDENLRAEILRYGNFVETAYKSFEFDPSSPNYGNSRFPKKTVLERCGLPNTGYKVTKYVRATSGIALPRWVEKAPTWVAKQSSYVGYVAVCHNKEVMKRLGRRDVVVAYRGTTTCLEWLENIRASLTDLPIPCSNFEKNGCGAMVERGFLSLYTSSLPAKTSSLQEMVRREISRILQTYRGEQLSLTVTGHSLGAALATLTAYDVKTAFPSLPVTVISFGGPRVGDRTFRRHLERQGTKVLRIVNSDDLITKVPGFVFDDDLPTTGAAGLHDPLFPSWIQKRVEEAQWVYAEVGKELRLCSRDSPYLGNTNVATCHELNTYMHLVDGFVSSTCPFRASAKRFLRQ 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01007 441 CDD Lipase_3 176 359 - -
Pste5g01007 441 Gene3D alpha/beta hydrolase 80 440 IPR029058 -
Pste5g01007 441 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 41 437 - -
Pste5g01007 441 SUPERFAMILY alpha/beta-Hydrolases 148 353 IPR029058 -
Pste5g01007 441 Pfam Lipase (class 3) 202 352 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01007 Pste-Chr5 6658696 6660021 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01007 76 441 Acyl Lipid Metabolism Gene Families AT2G44810 65.952 1.09e-180 510
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01007 5 6658696 6660021 Pste5g01007 5 6658696 6660021 ECH
Pste7g00171 7 1578622 1580731 Pste5g01007 5 6658696 6660021 PCT