Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01006 CAATGGTTCGTTGCTTTGATAATGATACTAACACTCTTCATATATATTTGAACACATTTTCAGGATAATCCTTCTTTGTTGGTTCAACAAAACCCCTCCAAAACCTTCATTCCCAATTATGCTTCCTCTTTCTCCCCAATCACAAATCACAATCTGAAGACTGAACACACAAACCCACATGCCACATGGCTTCTTCTCTCCTCCCAAGACCTCACATTCCCACACCCTTCATCTCCAAACTCAGCTCTTCCCCCAGAACTTGGAGTCTCTTCATCCTCACATACCCTTCACACCCCAAAAACCACAGCACGAAAAAACTATTCCTTTCCCCCACCAATGCAGTCTACACCCCTTCTACACCCTCCAAAACGGAGCTCCACAACGACCCCATCACCGTTCTCAACGAGAGAATTCGCCGCGACTACAGCAAGAAGGAGGCTTTCAGAACTGTGATGGACTCGGAGGAAGCGGGGAAGTACATGCGGATGGTGAAGGAGCAGCAGCAGAGAGGGTTGCAGAAGTTGAAGGGAGGTAGGGAGAGTAAAGATGGAGTCTTTAGCTACAGGGTCGACCCTTACGCGCTTCGTTCTGGGGACTATGTTGTGCACAAGAAAGTGGGTGTTGGAAGGTTTGTTGGGATCAGGTTTGATGTTGCTAAGAATTCTTCACAAGCCACTGAGTATGTTTTCATTGAGTATGCTGATGGCATGGCAAAGCTTCCTGTTAACCAGGCTGCTAAAATGCTCTATAGATATAGTCTGCCAAATGAAACCAAGAAGCCTAGGACATTGAGCAAGTTGAATGATACGAGTGCGTGGGAGAGAAGAAAGGTTAAAGGGAAGGTTGCAATACAGAAAATGGTTGTGGACTTGATGGAACTCTATCTACATAGGCTTAAACAAAGAAGGCCTCCCTATCCAAAGACTCCTGCCTTGGCTGAATTCACTGCACAATTTCCTTATGAACCCACACCAGATCAGAAAAAGGCATTTATTGATGTTGAGAGGGATTTGACAGAGCGAGAAACTCCAATGGACAGATTAATTTGTGGAGATGTTGGTTTTGGTAAAACTGAGGTTGCACTACGTGCTATCTTCTGTGTTGTCTCAGCTAAAAAGCAAGCAATGGTTCTGGCACCAACAATAGTTCTAGCTAAACAACATTTTGACGTTATTTCAGAGCGATTTTCTATATATCCTGATATTAAGGTTGGACTACTAAGCAGGTTTCAGACTAAAGCAGAGAAAGAAGAGAACTTGGGCATGATTAAGAATGGTATCCTGGATATTATTGTTGGGACTCATTCACTCCTAGGAGATCGTGTCACATATAACAATCTTGGTCTGCTTGTGGTTGATGAGGAGCAGAGGTTTGGTGTCAAACAGAAGGAGAAGATTGCTTCTTTTAAAACTTCTGTGGATGTACTTACTTTATCTGCAACCCCTATACCACGAACTCTTTATTTAGCATTAACAGGGTTTCGTGATGCTAGTTTAATTTCAACTCCGCCTCCAGAAAGAGTTCCTATCAAGACTCACCTTTCATCATTCAGTGAGGACAAAGTAATATTGGCCATAAAGTATGAGCTGGACCGTGGTGGTCAAATTTTTTATGTTCTACCACGTATTAAAGGACTTGATGAGGTAATGACATTTCTTCAAGAGTCATTTCCGAATGTGGAAATAGCCATTGCACACGGGAAGCTATACTCAAAGGAATTGGAGGATACCATGGAGAAGTTTGCTGTTGGTGAAATAAAAATCCTTATCTGCACAAACATAGTAGAAAGTGGGCTTGATATTCAAAATGCAAATACCATCATCATTCAGGATGTTCAACAATTTGGCCTTGCACAGTTGTACCAGGACGCCTATGAAGTGGCCCAGATGGTTTGCCGCATTGAAAACAATAACCTTCCCTCCTACAATGCCCCTGATAAGGAAATGCCTTGTTTGCGTGGAAGGGTTGGACGAGCAGATAAGGAAGCACATGCATACTTATTTTACCCTGATAAAGGCCTGCTTTCTGATCAAGCATTGGAGAGGCTTGCTGCTATCGAAGAATGCCGTGAACTTGGTCAAGGCTTCCAACTAGCTGAGAAAGACATGGGTATAAGAGGTTTTGGCGCAATTTTTGGTGAACAACAATCAGGAGATGTTGGAAATGTTGGTATTGATCTCTTTTTTGAGATGCTCTTTGAGAGCCTATCCAAGGTTGAAGATCATCGTGTTGTTTCTGTTCCTTATCAATTGGTGCAGGTTGACATAAACATCAATCCTCATCTCCCTTCTGACTACATTAATTATCTGGAGAACCCTATGAAAATAATAAATGACGCTGAGACAGTTGCTGAGAAAGACATCTGGAGTCTGATGCAATTTACAGAGAATTTGCGACGCCAGTATGGCAAGGAGCCTCGATCCATGGAGATTTTACTAAAGAAGCTTTACTTGAGGAGAATGGCGGCTGATTTAGGGATAACCAGAATTTACACTACAGGAAAGATGATCTTTATGAAAACAAACATGAGTAAAAAGGTATTCAAGTTGATGACACAGTCTGTGGCATCGGACTTACATAGAAATTCATTGGTTATTGAAGGGGATGAAATTAAGGCTGAACTTCTATTGGAGCTACCAAAAGAGCAACTTCTTAATTGGATCTTTCAATGCTTGGCTGAACTTCATGCTTCACTACCTTCCTTCCTAAAGTACTAGGTTCTGTACATGCTCAATTCTGCCAATGTGTAAGTTGGAAACTTGACTTACTGCTTTAGTTGCAAATATGTAAATTTTGGTGGATTTAGTGTGTTGAAGGGCCAGGAAATAACCATGGAGGATCCGAAACAAGAATTGTTTTGCTTGACTGGCTTAGCAGTACAGAACATTAGAACAAATTGGGACTATCAATTGATACTAGTGAGTAGTGAAACATTTGTTTTCAAGATGGATAATCAGAGCCGCATCAATGAGGTTAGTCACAAGCACCTTGGAGTTGGGGTAGTCTCAATTGTACTCTTGATTTGCATGCCTCATGCTAGACAGAGGCATGTGATATAAGAAGGCTACAGCTAGTGACTTAATCACCTCAATACTAGCACTCATTGAACAACTTTCCTTTTCAAAAACTACCTATAATGACCTACAGTCCTTAATTCCTTATCTAGAAAACCTTTAATTAAAATATTAAGAATTCACACCTTTCTGTATTCATGGGAGAGTAAAGAATTCTGTAACCACACTTTTCCTCATTTTTCCTATCTATAATCTTTCATTGGAGCTACCTTATATGGAGAAATTCAATGCAAAGATTCAGAGACTCAAGCTAGCCAATACACTCTAAGGAAACTAGAAATCAGTTTGGTGAGAGGCACATTTTTGTTGCAGATAAGTAAGAAATATATACTGTTGTTTATAGTTAGCTGTTGCTATTACGTGTCTGTTATTTTCCTCATAGAATTTTGTATTCTTTATACAAAGAAATTCTTGTAATCACTTGTTTTACCAATCGGTTCCATGTTTAAATATCT 3529 0.4061 MASSLLPRPHIPTPFISKLSSSPRTWSLFILTYPSHPKNHSTKKLFLSPTNAVYTPSTPSKTELHNDPITVLNERIRRDYSKKEAFRTVMDSEEAGKYMRMVKEQQQRGLQKLKGGRESKDGVFSYRVDPYALRSGDYVVHKKVGVGRFVGIRFDVAKNSSQATEYVFIEYADGMAKLPVNQAAKMLYRYSLPNETKKPRTLSKLNDTSAWERRKVKGKVAIQKMVVDLMELYLHRLKQRRPPYPKTPALAEFTAQFPYEPTPDQKKAFIDVERDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAKKQAMVLAPTIVLAKQHFDVISERFSIYPDIKVGLLSRFQTKAEKEENLGMIKNGILDIIVGTHSLLGDRVTYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLISTPPPERVPIKTHLSSFSEDKVILAIKYELDRGGQIFYVLPRIKGLDEVMTFLQESFPNVEIAIAHGKLYSKELEDTMEKFAVGEIKILICTNIVESGLDIQNANTIIIQDVQQFGLAQLYQDAYEVAQMVCRIENNNLPSYNAPDKEMPCLRGRVGRADKEAHAYLFYPDKGLLSDQALERLAAIEECRELGQGFQLAEKDMGIRGFGAIFGEQQSGDVGNVGIDLFFEMLFESLSKVEDHRVVSVPYQLVQVDININPHLPSDYINYLENPMKIINDAETVAEKDIWSLMQFTENLRRQYGKEPRSMEILLKKLYLRRMAADLGITRIYTTGKMIFMKTNMSKKVFKLMTQSVASDLHRNSLVIEGDEIKAELLLELPKEQLLNWIFQCLAELHASLPSFLKY 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01006 843 Pfam Helicase conserved C-terminal domain 463 561 IPR001650 -
Pste5g01006 843 Pfam TRCF domain 695 782 IPR005118 GO:0006281
Pste5g01006 843 Pfam DEAD/DEAH box helicase 283 421 IPR011545 GO:0003676|GO:0005524
Pste5g01006 843 SUPERFAMILY TRCF domain-like 690 833 IPR037235 -
Pste5g01006 843 CDD DEXHc_TRCF 247 440 - -
Pste5g01006 843 Gene3D - 690 836 IPR037235 -
Pste5g01006 843 SMART ultradead3 257 449 IPR014001 -
Pste5g01006 843 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 276 438 IPR014001 -
Pste5g01006 843 Gene3D - 580 686 IPR027417 -
Pste5g01006 843 SMART CarD_TRCF_2 132 234 IPR003711 -
Pste5g01006 843 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 590 688 - -
Pste5g01006 843 Pfam CarD-like/TRCF domain 133 233 IPR003711 -
Pste5g01006 843 SMART TRCF_a_2_a 693 791 IPR005118 GO:0006281
Pste5g01006 843 SUPERFAMILY CarD-like 127 195 IPR036101 -
Pste5g01006 843 Gene3D - 136 196 - -
Pste5g01006 843 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 443 IPR027417 -
Pste5g01006 843 Gene3D - 197 440 IPR027417 -
Pste5g01006 843 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 441 674 IPR027417 -
Pste5g01006 843 Gene3D - 133 560 IPR027417 -
Pste5g01006 843 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 456 642 IPR001650 -
Pste5g01006 843 SMART helicmild6 485 573 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01006 Pste-Chr5 6651985 6670537 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01006 5 6651985 6670537 Pste5g01006 5 6651985 6670537 ECH