Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00963 AGACCCAATTTCAGGAATAATGATGGATCCCGCTTTTGGGATACCTGTCACGCTAACTTGAGAGTGAAGAGTCCACACACACACACACAGACCATGACATCTACACAACACAAAACACCCGGGCAGCTCTCCATCAGCGTTGAAAACCCTAGCAGCCACCACCGTGCCACCACCGCGCCATCATTCTGCATCTTCACACACCACCGTGCCAGCTTTGACCACACCACTGCGCCATCTTCAGCTGCTCTCGTCGTTACCATTTTCCCCGCTGATTCCAAGTTGCTCTGCACCGGTGTACAAGCTAAATTATTTCAATCTTCCAAGAATCGAACCGAGATGCTTGCGATGAGAAAGCTCAAAACGGGACCTGATATCCCTTTTGTGTTATATGTTATGGTTGCTAATTGCAATTATGGAACAGCCCGAGTTTCCAGTAACAACACTGTCCACTCTATTGTTAAGAATGTGGGCCCTTATTTAGCCAACTCAAGTTTGCATGCATTTCCAATGGGATCAGAGAATACATTTTTCCTTCAAGGATTATATTTCTCTAGTGTGGCTGAAAGAATCCTGGTCCAGGCTCAAGACCCTGCCAAAGTTAGTTCGGAAATACAAAATGCTCTTGATGCTAATCAATTAGATTATTCATGGAAATTATTTGAGCAGCATATGTACATGGAGGGATTTCCTAGAAAATCTGTCATCAGCAAGCTTGTAACAAGTTATGTGGAGAGCCTTGATATTCAATATCTAGGAAAAGCTTATGAATTGGTCGAACGTGCTATTGAGGGAGGTAAACAAGACTTGTTAGAAAAGGGGGTGCTTATATATCTCAGCTTTGGCCTTGCAAAAGCTAGACTACCAGTTCCAGCGTCAACTGTTTTAAGAAAGATGATAGCTATGGAGCATTTTCCCTCAGTCACTGCTTGGTCTGCAGTTTTGGCACACATGTCACAAACAGCAGATGGAAGTTACCTTGCTGCTGAGTTGATTCTTGAGATAGGTTATTTGTTCCAGAACAATAGAGTAGATCCACGTAAAAAGAGCAATGCACCTTTGATAGCCATGAAACCAAACACTGCTGCTTTCAACATTGCTCTGGCAGGGTGTCTCTTATTTGAGACATCTAGGAAGGCAGAGGAGCTTCTTGATATAATGCCTCGAATTGGTGTCAAAGCTGATGCAAACTTACTGATAATAATGGCACGTGTGTATGAGAGAAATGGGCGTAGAGAAGAGCTCAAGAAGCTGCAAAGGCATATAGAGGAGGCTCCAAATCTAACTGATTTACAGTTCCGACAGTTCTATAATTGTTTGTTGACATGCCATTTGAAATTTGGGGATCTAGATTCTGCATCAAACATGGTTTTGGAAATGCTTAGGAAAGCAAAGGAAGCAAGAAATTCTCTTGCAGCTGCCAAATTTATGACAAAGGCTGCTGAAATTGGTAATAGCCATTCTCCTGGACTGGCTTCTGGGCATAGTTTGAACAACAGTAAAGATTTAGATAGTTTAGAAAATAACAGGTCAATTCTAAATGTGGTATTATCTTATGAGGAGTTCTCTAAAGATAGAAATTTCTTAAAGCTTGAATCAGAGTCAAAAGCTATACTTGGTTCTTTATTAGCTAAGTTGCAAATGCAGGTGAACTTGATTACAACCAAACACGGTATACTGCAACCAACTGAAGCAATTTATGTGAAATTAGTTAAAGCTTTTCTAGAAGCTGGCAAGACCAAGGATTTGGCAATGTTTCTTCTCAAAGCAGAAAGAGAAGATTTACCCTTTTCCAGTGATAACTCAGCCTTGGTTCATGTTATTAATGCATGTATTTCACTTGGATGGCTGGATCAAGCTCATGATCTCCTTGATGAGATGCGTCTAGCTGGAGTTAGAACTGGTTCATCCGTATACTCCTCTCTTTTGAAAGCATATTGCCGAGCCAATAGAGCCGCAGATGTCACATCGCTTTTGAGAGATTCTAGAATAGCTGGTATCCAGCTTGACTCGAGCTCTTATGAGGCAATGATCCAATCCAGGGTGCTCCAGCAAGACACACAGGGAGCACTCCAACTATTTCAGGAGAGGAAAGAGGCTAGAATTCCAAAAATCACTCAACAAAACTCTGGCATGATGGCTAAAAATGATGTGGAGACAGATGAAGCTGGGCTGGTGACCAAGCTGTTGCAGGAAATCAAGGAAGGGCAGAGAGTGGATTGTGGAGTTCATGACTGGAATAATGTAATTCACTTTTTTTGCAAGAAGAGACTGATGCAAGATGCAGAAAAAGCTCTAAAGAAGATGAGAAGCTTAGGCCACTCACCAAATGCACAGACTTTCCATTCTATGGTCACCGGGTATGCTGCAGTTGGAGGGAAATATCAAGAGGTAACAGAACTGTGGGGTGAGATGAAAGCTCTTGCTTCTTCTATCTCCATGAAGTTTGATCAGGAACTTCTCGATTCTGTGCTATATACATTTGTGAGAGGCGGATTCTTTGTTCGAGCTAATGAAGTTGTGGTGATGATGGAAAAAGGAAACATGTTTATTGACAAGTACAAGTACAGAATGCTATTGTTGAAATATCATAAAACACTTTACAAAGGGAAGGCTCCGAAATTTCAGACAGAATCCCAACTGAACAAAAGGGAAGCAGCCCTTACTTTTAAAAGATGGATAGGCTTGACTTGA 2691 0.4173 RPNFRNNDGSRFWDTCHANLRVKSPHTHTQTMTSTQHKTPGQLSISVENPSSHHRATTAPSFCIFTHHRASFDHTTAPSSAALVVTIFPADSKLLCTGVQAKLFQSSKNRTEMLAMRKLKTGPDIPFVLYVMVANCNYGTARVSSNNTVHSIVKNVGPYLANSSLHAFPMGSENTFFLQGLYFSSVAERILVQAQDPAKVSSEIQNALDANQLDYSWKLFEQHMYMEGFPRKSVISKLVTSYVESLDIQYLGKAYELVERAIEGGKQDLLEKGVLIYLSFGLAKARLPVPASTVLRKMIAMEHFPSVTAWSAVLAHMSQTADGSYLAAELILEIGYLFQNNRVDPRKKSNAPLIAMKPNTAAFNIALAGCLLFETSRKAEELLDIMPRIGVKADANLLIIMARVYERNGRREELKKLQRHIEEAPNLTDLQFRQFYNCLLTCHLKFGDLDSASNMVLEMLRKAKEARNSLAAAKFMTKAAEIGNSHSPGLASGHSLNNSKDLDSLENNRSILNVVLSYEEFSKDRNFLKLESESKAILGSLLAKLQMQVNLITTKHGILQPTEAIYVKLVKAFLEAGKTKDLAMFLLKAEREDLPFSSDNSALVHVINACISLGWLDQAHDLLDEMRLAGVRTGSSVYSSLLKAYCRANRAADVTSLLRDSRIAGIQLDSSSYEAMIQSRVLQQDTQGALQLFQERKEARIPKITQQNSGMMAKNDVETDEAGLVTKLLQEIKEGQRVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAVGGKYQEVTELWGEMKALASSISMKFDQELLDSVLYTFVRGGFFVRANEVVVMMEKGNMFIDKYKYRMLLLKYHKTLYKGKAPKFQTESQLNKREAALTFKRWIGLT 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00963 896 Gene3D Tetratricopeptide repeat domain 546 716 IPR011990 GO:0005515
Pste5g00963 896 Gene3D Tetratricopeptide repeat domain 717 812 IPR011990 GO:0005515
Pste5g00963 896 NCBIfam pentatricopeptide repeat 745 777 IPR002885 -
Pste5g00963 896 Pfam PPR repeat 637 660 IPR002885 -
Pste5g00963 896 Pfam PPR repeat 606 631 IPR002885 -
Pste5g00963 896 Pfam PPR repeat 436 462 IPR002885 -
Pste5g00963 896 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 741 775 IPR002885 -
Pste5g00963 896 Gene3D Tetratricopeptide repeat domain 198 501 IPR011990 GO:0005515
Pste5g00963 896 Pfam PPR repeat family 743 788 IPR002885 -
Pste5g00963 896 PANTHER BNAC05G43320D PROTEIN 158 895 - -
Pste5g00963 896 MobiDBLite consensus disorder prediction 25 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00963 Pste-Chr5 6328256 6332966 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00963 637 859 Miscellaneous Gene Families AT4G11690 21.681 9.84e-08 53.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00963 5 6328256 6332966 Pste5g00963 5 6328256 6332966 ECH