Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00955 ATGTCTGGACTGATTGAAGGGCTTCCTGATGCTGTTGCAATAAGGTGCCTTGCTAGGGTTCCCTTCTACCTTCACCCGGTGTTGGAACTTGTCTCTCATTCCTGGCAAGCTGCTATTCGTAGTCCTGAACTGTTTAAAGCTCGGCAGGAGGTTGGTTCAACTGAGGAACTGTTGTGTGTCTGTGCTTTTGATCCAGAGAACTTATGGCAGCTGTATGATCCTATGCGAGATCTCTGGATTACACTTCCTGTTCTTCCCTCAAAGATCAGGCACCTTTCCCACTTTGGTGCTGTTTCTACTGCTGGAAAGTTGTTTGTTATTGGCGGTGGGAGTGATGCTGTCGATCCTTTGACTGGTGACCAAGATGGTTGTTTTGCAACAGATGAAGTCTGGTCATATGATCCTGTAGTCCGGCAGTGGGCTCCTCGTGCATCAATGCTTGTTCCCCGTTCTATGTTTGCATGCTGTGTTTTGAATGGGAAAATTATTGTGGCTGGGGGCTTCACTAGCTGCCGAAAATCAATATCTCAAGCAGAAATGTATGATCCTGACAAGGATGTTTGGATTCCAATGCCTGATCTTCATCGTACTCATAATTCAGCCTGTTCAGGAGTAGTGATTGGTGGAAAGGTGCATGTGCTGCACAAGGATATGTCAACAGTGCAAGTTTTAGACAATGCAGGGCCTGGTTGGACTGTTGAGGAATGTGCATGGCTCCAAGGTCCGATGGCAGTTGTCCGTGATGCTCTTTATGTGATGAGCCATGGATTAATCTTCAAGCAGGACAAAGAAGTGAGAAAGGTTGTAGGTTCAGCTTCGGAGTTTCGTAGGAGAATTGGGTTTGCAATGACTGGACTAGGAGACGAGTTATACGTGATTGGAGGATTCATTGGACCAGAGAGATGGAATTGGGACATTAAGCCATTATCCGAAGTTGATGTTCTCACACTTGGAAGTGAGAGACCAACTTGGCGCCAAGCAGCTCTAATGACTCGGTGTCATGGTACTATTCTTGGTTGTACGCTGCTGAGAATTTAG 1038 0.4644 MSGLIEGLPDAVAIRCLARVPFYLHPVLELVSHSWQAAIRSPELFKARQEVGSTEELLCVCAFDPENLWQLYDPMRDLWITLPVLPSKIRHLSHFGAVSTAGKLFVIGGGSDAVDPLTGDQDGCFATDEVWSYDPVVRQWAPRASMLVPRSMFACCVLNGKIIVAGGFTSCRKSISQAEMYDPDKDVWIPMPDLHRTHNSACSGVVIGGKVHVLHKDMSTVQVLDNAGPGWTVEECAWLQGPMAVVRDALYVMSHGLIFKQDKEVRKVVGSASEFRRRIGFAMTGLGDELYVIGGFIGPERWNWDIKPLSEVDVLTLGSERPTWRQAALMTRCHGTILGCTLLRI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00955 345 SUPERFAMILY Kelch motif 61 321 IPR015915 GO:0005515
Pste5g00955 345 CDD F-box_AtAFR-like 4 48 - -
Pste5g00955 345 Gene3D - 61 341 IPR015915 GO:0005515
Pste5g00955 345 Pfam Kelch motif 149 194 IPR006652 GO:0005515
Pste5g00955 345 Pfam Kelch motif 92 146 IPR006652 GO:0005515
Pste5g00955 345 PANTHER OS02G0202900 PROTEIN 3 293 IPR045887 -
Pste5g00955 345 SMART kelc_smart 289 344 IPR006652 GO:0005515
Pste5g00955 345 SMART kelc_smart 161 208 IPR006652 GO:0005515
Pste5g00955 345 SMART kelc_smart 103 160 IPR006652 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00955 8 188 Miscellaneous Gene Families AT4G33900 30.000 8.56e-14 69.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00955 5 6278520 6279557 Pste5g00955 5 6278520 6279557 ECH