Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00897 CTGTAATATTGCTTATCTTCATTGTTTGTTCTAACAATGCATGGCTTATTAATGGAGAGATCAAAGGGAAAGGCAAGCCTATTCCCACCATCAGTTTCTCAAGTTGCATGAATAATCCTTACGGGCTCACTCTAATAAGTTGTCAAATGTTTACTTGCTTTGTTTTCTGCAGGTTTGTTGAATCTGGTTCTATTTTATCTCATTTGAGATTGAGTCTGTTGACAACTATGTATTCTGGTGGTTATACTGCTCTAGTTACAAATTTATCCCCAAGAGCAACAGAGGATGACGTGCGCAATTTTTTCACATACTGTGGTTTAATTGAGCATATTGAAATATTAAGATCCGGTGATGGTGAAAATGCATCTACTGCATATGTGACTTATCGGGATGCTTATGCCCTGGAAACTGCATTATTGCTGAATGGATCAATGATATTGGACCAATGTATATTCATTTCACGCTATGAAGCTTACATACACGACTATGATAATTGGACCAGTCATACGTCAAAGCCTGAATACAGTATTACAACTTCACAAGATGTTCACACGGATAAGTTTGTCGCTTCCCCTGGAGAAGCACTAACTCTAGCTCAGGTGGTTGTCAAAACAATGGTTGCTAAGGGATATGTGTTGGGCAAAGATGCATTTGTCATGGCGAAAGCTTTTGATGAATCTCATAATGTATCATCTACAGCAGCATCCACGGTTGCTGAAATCAGCAATAAAATTGGGTTGACTGATACCATTAATTCAGGAATTGAAACTTTTAAATCTGTGGATGAGAAGTATCATGTCACAGACTTCACTAAATCAGCTGCAACTGTGACAGGGACAACAGCCATAGTTGTTGCATCAGTTACCGGGAAAGCCGCTGTTGCAGCTGGAACCGCTATAGCTAACAGTAGCTACTTTGCCAAAGGAGCTCTTTGGGTTTCGGATATGCTGACACGTGCAGCAAAAGCAGCTGCTGATTTGGGTCAGAATGAAAAGAAATGAAACTCCAAACGTAAACTGCTGTCTAATATGTTAGTTGTTGAACACAAGTAAACAGCAGCATTTGTCTGTTGCTACTGTATTATTATAAGACATGAACTTGCTTTACATGTGTGGCTATTATCTGGTGCAAATGTTCATATCAGTAGTTTTTGAGAATCCATGGTAAGCTGCCACTTATTTATGTACCCTTTCGGAAAATATACTATATTGGTACAATTTTAAGTTGTGAATACCAAGTTTCTTCTTGTTTACTTTCT 1258 0.3847 MNNPYGLTLISCQMFTCFVFCRFVESGSILSHLRLSLLTTMYSGGYTALVTNLSPRATEDDVRNFFTYCGLIEHIEILRSGDGENASTAYVTYRDAYALETALLLNGSMILDQCIFISRYEAYIHDYDNWTSHTSKPEYSITTSQDVHTDKFVASPGEALTLAQVVVKTMVAKGYVLGKDAFVMAKAFDESHNVSSTAASTVAEISNKIGLTDTINSGIETFKSVDEKYHVTDFTKSAATVTGTTAIVVASVTGKAAVAAGTAIANSSYFAKGALWVSDMLTRAAKAAADLGQNEKK 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00897 297 Gene3D - 46 121 IPR012677 -
Pste5g00897 297 SMART rrm1_1 47 118 IPR000504 GO:0003723
Pste5g00897 297 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 50 114 IPR000504 GO:0003723
Pste5g00897 297 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 46 122 IPR000504 GO:0003723
Pste5g00897 297 SUPERFAMILY RNA-binding domain, RBD 42 120 IPR035979 GO:0003676
Pste5g00897 297 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 45 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00897 Pste-Chr5 5811388 5815837 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00897 5 5811388 5815837 Pste5g00897 5 5811388 5815837 ECH