Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00874 CTGAGATCCGCTAAAAGTCCACACTGCACACCCTCTTCTTCTTTTCCTCTCAGATCTTCAAGTCGATATGCTCAGAACATTAGCCAGGGAGTTCAAGCGCACCACGCTTACCAATAGTTTGCTTAAAAAACGCAGCAGATTCTATGCAACTACGGTTGGTGGAAGGTTAGAGGGGAAAGTGGCACTCATAACTGGATCAGCAAGTGGACTCGGCAGGGCCACGGCCCATGAGTTTGTCCAACATGGGGCCCAAGTAATCATTGCTGACAATGACACTAACCTTGGGCCACAAGTTGCAAAAGAGTTGGGCCCATTGGCCCGCTATGTGGAGTGTGATGTCAGTGACGAGGCCCAAGTGGAAGAGGCCGTGAATGTTGCCATGGCCCACTATGGCAAGCTTGACATCATGTACAACAATGCTGGCATCACTGGCCCATCAATTCCTCCAACCATAGTTGAGCTAGACCTTGATGTTTTTGATAAAGTTATGAGGATCAATGTAAGGGGAATGATTGCTGGTATAAAGCATGCTGCTAGGGTCATGATACCTGTGGGCTCAGGGTCCATTCTATGCACATCAAGCATAAGTGGGGTCATGGGTGGGCTTGGGCCTCATCCTTATACAATATCAAAGTTTACAATACCTGGGGTAGTGAAATCTGTGGCTAGTGAGTTATGCAAAACTGGGATCAGGATCAATTGCATATCCCCAGCTCCAATTCCTACACCTATGGTTTTGACTCAAATAAGGAACTTTTATCCTGGTTTAACCCAAGAACAGATTCAGGGAATGGTGAATGGGTTTGGTGAACTCAAAGGTGCTAAGTGTGAGGACATTGATGTGGCTAGGGCTGCATTGTTCTTGGCATCAGATGAAGCAAAGTTTATCTCTGGCCACAACCTCATTGTGGATGGAGGATTCACCAGCTTCAAAACTCTTACATTCCCTTCTCCAGATCAAACTGCATAACCTTAATTGACATATATATTTAAGTTTAGTTTTC 1004 0.4572 MLRTLAREFKRTTLTNSLLKKRSRFYATTVGGRLEGKVALITGSASGLGRATAHEFVQHGAQVIIADNDTNLGPQVAKELGPLARYVECDVSDEAQVEEAVNVAMAHYGKLDIMYNNAGITGPSIPPTIVELDLDVFDKVMRINVRGMIAGIKHAARVMIPVGSGSILCTSSISGVMGGLGPHPYTISKFTIPGVVKSVASELCKTGIRINCISPAPIPTPMVLTQIRNFYPGLTQEQIQGMVNGFGELKGAKCEDIDVARAALFLASDEAKFISGHNLIVDGGFTSFKTLTFPSPDQTA 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00874 300 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 35 286 IPR036291 -
Pste5g00874 300 Gene3D - 24 293 - -
Pste5g00874 300 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 185 204 IPR002347 -
Pste5g00874 300 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 109 120 IPR002347 -
Pste5g00874 300 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 173 IPR002347 -
Pste5g00874 300 Pfam Enoyl-(Acyl carrier protein) reductase 43 286 - -
Pste5g00874 300 PRINTS Glucose/ribitol dehydrogenase family signature 159 175 IPR002347 -
Pste5g00874 300 PRINTS Glucose/ribitol dehydrogenase family signature 249 269 IPR002347 -
Pste5g00874 300 PRINTS Glucose/ribitol dehydrogenase family signature 185 204 IPR002347 -
Pste5g00874 300 PRINTS Glucose/ribitol dehydrogenase family signature 38 55 IPR002347 -
Pste5g00874 300 PRINTS Glucose/ribitol dehydrogenase family signature 206 223 IPR002347 -
Pste5g00874 300 PRINTS Glucose/ribitol dehydrogenase family signature 109 120 IPR002347 -
Pste5g00874 300 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 33 289 - -
Pste5g00874 300 FunFam Short-chain dehydrogenase reductase 24 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00874 Pste-Chr5 5587875 5591527 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00874 34 286 Acyl Lipid Metabolism Gene Families AT3G55290 31.939 4.67e-24 97.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00874 5 5587875 5591527 Pste5g00874 5 5587875 5591527 ECH