Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00845 TCCAGGTCGGGAATGAGGGTTTAATTGTTGTTTTTCGAAGTACACAAAAACCCGTCTTCCTCTCCTTCTCTTCCATACTCACTTCCACTGTTCCAAGTCAAAACCATGGAAGCAACAAGATGCTCCCCTAATCACTTCTATCCACACTGCTTCCAAACAAAACTCAACGCATCCAGAGAAAGAAGATACGTAAAATGCATAAACGGCATTGGAGCCAGGGTTTCCCTTTTTACAATCCCCGCATTCAACACGCCGAACCGGTTTTTGTTTCGGAAGGTGAACCGGACTCTCTCTGTTAACTTCTCCGACCGGCTTCGAGGTGATTATGCGCGCGTCGAGGCTCCGAATAACGAAATTCTGAACGAGGAAGATGTTCCGGCCAGTCGCGGCGACGGAGGGGAAGTCGCTGTTGCGTCGTCTGCGAGTGCTGACAACTCGGGAAACCTGCAATTGAAACCTGTGAATGTGATGTTCAGAAACAGGTTTCTGAACTTTGTGCGATTGGGTTCTGTGATTAACAGCGCCGCTGAGTCGTTTTTCAAGAGCGAGATTCGGAGGAGGCTGTTCGTGACGGCTGTGTTGATTGTTATTAGTCGCGTTGGTTATTTTATTCCTCTCCCGGGCTTTGACAGAAGGTTGATACCGGATGACTACTTGAGCTTTGTGGCGGGATCATCTGTTGATGAACTTGGTGACTTCACTGCTGAGCTCAAGCTATCTATTTTTCAGCTTGGAATCAGTCCTCAGATAATAGCATCCATTATCATGCAGGTACTATGTCATGTTGTCCCTTCTCTAGTAAAGCTACGGAAAGAAGGTCTGGATGGGCATGAGAAGATTAAGAGTTATATATGGTGGATGTCATTTGGCTTTGCAATTTTGGAAGCTTTAATAGTTGCTTGCTACTCACTTCCATATTCAATTTATGCTTCTACTTATAGGTTCAAGCATGTAATGGTGACAGCTGTTTTATTGGTTTGTGGTGCAATGACTATTACATGGATATGTGATACCATATCAGAATCTGGATTTGGTCAAGGTTCATCTCTAATCATATGTGTGGGAATACTTACGGGATACATGGAGACGTTATACAAAATGCTTACTCAGCTTTCAGTGAGTGCTGTAAGTTGGTGGCCATATGTGCTTGCAGTATTGGGTATCTTCACTGTTGTCACTATGTGGGCAGTTGTAGTAACTGAAGGTTGCAGGAAAGTAAAGCTACAGTACTATGGTTTTAAACTTGCTTCTGCTGCAAGAGAGCAATCACCTATCACTGAAGTGGAGCCCTATATTCCTTTCAATATTAATCCAGCAGGGATGCAACCTGTTCTTACCACCTCTTACCTCTTGGCATTTCCGAGCATTCTTGCAAGTCTGCTGAGGTCACCTTTCTGGGAGCATGTCAAGGAAATATTGAATCCTGAAACTTCTGTTGGTGCTGAGCCATGGGTTTACTATTCCATATATGCTTTTTTTGTCTTCCTGTTCAATATATTCGATATTGCTAACATGCCAAAGGAAATTGCTGATTATTTAAATAAGATGGGTGCGAGAATCCCAAACATAAAGCCTGGGAAGGCTACTATCGAGTACCTCTCCAAGGTTCAGGCATCCACACGGTTTTGGGGGGGGCTATTGTTAAGTGTTCTGGCCACTACATCAAGTGTTCTTGATCACTATTTACGGCGTATTAATGCTGGATTTGCTATTGGTTTTACATCAGTTCTAATTATTGTTGGTTCCATTATTGAACTTCGAAGATCATATCAAGCATATAATGTGATGCCAAGCTTAAGCAATGCTTTGAGACGATATGGTGTATAACTTAACTTCTGGAAAGGCTATGCTGTCACTCCCCTGTGCCAACTTAATTTTAACCTCTGGGATAAGATAACCTTGGTCAACATGGTTTTTGATTTTCAGGAAGCTTGGTTTTTCGGGGACATTACAGATTTACGGTGTAGTTTGCGGGTCTAAGAATGTTGAGGTTTGTAGTGTTGCGTACTTGTGTTGCTAGTAAGGAGGTGCCTGCCGATACTTGATAAGATGATTCAGAAGCCTCAGTTTTGGTTTCTTTCTGGAAGAAATTTGTTTCAAGGATTTAGAAAACTAATTAGTTAGGTTATAGTTGTAGCTGCAGCTGAAATTTGTACAGAAAATTCTCGGTTATAGACGTGATATGTAATATAAAAACGAGGTGTTCGGAAGTAGGAGGTTAAATGCCTTGATAGTGAGTTGTTATCCCGAAAAAGAGGCAGTTACTCT 2268 0.4233 MEATRCSPNHFYPHCFQTKLNASRERRYVKCINGIGARVSLFTIPAFNTPNRFLFRKVNRTLSVNFSDRLRGDYARVEAPNNEILNEEDVPASRGDGGEVAVASSASADNSGNLQLKPVNVMFRNRFLNFVRLGSVINSAAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPDDYLSFVAGSSVDELGDFTAELKLSIFQLGISPQIIASIIMQVLCHVVPSLVKLRKEGLDGHEKIKSYIWWMSFGFAILEALIVACYSLPYSIYASTYRFKHVMVTAVLLVCGAMTITWICDTISESGFGQGSSLIICVGILTGYMETLYKMLTQLSVSAVSWWPYVLAVLGIFTVVTMWAVVVTEGCRKVKLQYYGFKLASAAREQSPITEVEPYIPFNINPAGMQPVLTTSYLLAFPSILASLLRSPFWEHVKEILNPETSVGAEPWVYYSIYAFFVFLFNIFDIANMPKEIADYLNKMGARIPNIKPGKATIEYLSKVQASTRFWGGLLLSVLATTSSVLDHYLRRINAGFAIGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00845 573 PRINTS Preprotein translocase SecY subunit signature 449 471 - -
Pste5g00845 573 PRINTS Preprotein translocase SecY subunit signature 245 268 - -
Pste5g00845 573 PRINTS Preprotein translocase SecY subunit signature 306 329 - -
Pste5g00845 573 PRINTS Preprotein translocase SecY subunit signature 280 305 - -
Pste5g00845 573 PRINTS Preprotein translocase SecY subunit signature 204 224 - -
Pste5g00845 573 PRINTS Preprotein translocase SecY subunit signature 153 171 - -
Pste5g00845 573 PRINTS Preprotein translocase SecY subunit signature 537 555 - -
Pste5g00845 573 PRINTS Preprotein translocase SecY subunit signature 404 423 - -
Pste5g00845 573 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 141 561 IPR002208 GO:0015031|GO:0016020
Pste5g00845 573 SUPERFAMILY Preprotein translocase SecY subunit 135 558 IPR023201 -
Pste5g00845 573 Pfam SecY 205 551 IPR002208 GO:0015031|GO:0016020
Pste5g00845 573 Gene3D SecY subunit domain 136 563 IPR023201 -
Pste5g00845 573 FunFam Preprotein translocase subunit SCY2, chloroplastic 137 563 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00845 15 573 Miscellaneous Gene Families AT2G31530 71.964 0.0 803
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00845 5 5346504 5354356 Pste5g00845 5 5346504 5354356 ECH