Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00819 ATTTTTTGGAAGGAATAACTTAAGGGAAGAGAAGAAGATGAGCGGATATGGACCACTGATAAGCTCTAAATCTAAATCAAACGGGTCGGACAGCGACCTCCGAGTCTTGTGTGTGTCAGAAAACCCTGCCGTCACCGTCTTCTCAGCCACCATGAAGCTCGTCAGGTTCCTCATGAAGTTGAACAATGAAACCGTATCAATCGAGCTCAAGAACGGCACAGTTGTTCACGGCACCATTACAGGTGTTGATATCAGTATGAATACACATTTGAAAACAGTTAAACTAACTCCGAAAGGGAAAAACCCAGTAACTTTGGATCATCTCAGTGTGAGAGGCAACAACATTCGATATTATATACTTCCTGACAGCTTGAATCTTGAGACTTTACTGGTTGAAGAGGCTCCTAGGATCAAGCCTAAGAAGCCAACTGCTGGGAAGCCTTTGGGTAGAGGACGGGGGCGTGGACGTGGCCGTGGTCGCGGTCGTGGCCGTTAAGTTGCACATCACAAAATTTGTGGCATTTGGTTGTACCTTTATTTTAGGGAAATTTTCTGAGAAGTTTTAAAGATGTTGTAGGAGTGCTGACGTTAGTTAGTCACGCAGACTTTGTTCATGTTGCCATTTTCTTGCATCGATGCTTTGAAGTTCTCGTGTATAATTCCTTGCTGTTGGATAACTGTCATATCTCTCGTGTTTCAGCTGAATGAAACTGCCTATATAATATATGTGTAGTTTTATGGGACAAGGTGAAGTTATAGGAATTACTGATGATAGCCGTTTGTGGTGGTCGTTGTGTGAATTAGAGACATTTTACATATATTGGATATTAAACTTGTTCCTATTGTAAGAGGGATATGGAAAGCCGTAAAAGCTACTCGGAT 882 0.4218 MSGYGPLISSKSKSNGSDSDLRVLCVSENPAVTVFSATMKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTPKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEEAPRIKPKKPTAGKPLGRGRGRGRGRGRGRGR 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00819 152 Gene3D - 34 123 - -
Pste5g00819 152 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 42 151 IPR027141 GO:0006396
Pste5g00819 152 SUPERFAMILY Sm-like ribonucleoproteins 42 151 IPR010920 -
Pste5g00819 152 SMART Sm3 43 108 IPR001163 -
Pste5g00819 152 MobiDBLite consensus disorder prediction 124 152 - -
Pste5g00819 152 Pfam LSM domain 43 107 IPR001163 -
Pste5g00819 152 CDD Sm_D1 40 131 IPR034102 GO:0000387
Pste5g00819 152 ProSiteProfiles Sm domain profile. 40 112 IPR047575 GO:0003723
Pste5g00819 152 MobiDBLite consensus disorder prediction 131 152 - -
Pste5g00819 152 FunFam Small nuclear ribonucleoprotein Sm D1 39 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00819 Pste-Chr5 5215118 5224397 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00819 5 5215118 5224397 Pste5g00819 5 5215118 5224397 ECH