Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00808 ACCTTCTCCTCCTTCTTCTTCTTCTTCTTCTTCTTTCTTTCTCTTTACCTTACCTTACCCCTCTCACTCTTCAACTCTTCTTTGTCATGTGAGTGCCATAAAGGGTTTGCGTCTTTCTTTCCTCACTCTAAGCTCATTCACCTATTGGGTGCTGTTGTGTGGTGTATAATGTAAATTAGGATTTTTGTGCAAAACTTGGATTTTCTCAGATCTATCCAACTTCTCTTTTTATCCTTTTCTTCTGTTTGGAAATCGTCATCATCACCATTTGATTTGCAAGATCATAATTTTTCGGTTTGTTTTTTGTTTTTTCCTTGAGAAAAATTTGCGTTCTTTTTGGCTACCCTCCAAAGAGATCCGAGTTGGGGAGTGTAAAATTTTCGATTTTTATCAGTAGTACCCTCTTTTTAAGGCCTTCCTTCATGTTCTAGATTTGAAGATCTTTTTCATTACCTCACTCTTGTTTGGACCAAGATCTGTTTCCCCTTTTTCTGCTTCTAGATCTTGGTTTTCTCCTTTATGTAGTAGGCCTTCAAATTTGAGAGCTTTACTTGTCTGGGGTTGTGTTATTTTTTTTTTATTTCTATCATCTTCATCCCCCTTTGGAGCATGAAAATTTTCCTGGAAAGTGGGGGAGGTTGGATCACCGGCTGAGAAAAAGAAAAGAAACGAGAAAGAAAAGGAAGGATGAATTATTTCCCCGACGAGGTTATAGAGCACATATTTGACTATGTATTGTCACACCGTGACCGGAACGCTCTGTCTTTGGTGTGTAAAAGTTGGTACAGAATAGAGAGATGTACGAGGCAGAGGGTGTTCATAGGGAACTGTTATTCCATCACTCCGGAGAGGTTGATCCAGAGGTTTCCTGGTCTCAAGTCTTTGACTTTGAAGGGAAAGCCTCATTTTGCTGACTTCAGTTTGGTTCCTTATGGTTGGGGTGGCTTTGTGTCTCCATGGATTGAGGCACTGGCTAAGAGCAGGGTTGGTCTGGAGGAGCTTAGGCTCAAGAGGATGGTGGTCTCGGATGAGAGCCTGGAGCTACTTTCTCGTTCTTTCACTCACTTTAAGTCTTTGGTTCTTGTTAGCTGTGAAGGGTTCACCACCGACGGCCTTGCTGCTATAGCTGCAAATTGCAGATTTCTTAGGGAGCTGGATCTGCAAGAAAATGAAGTTGAAGATCACAAAGGCCAGTGGCTAAGTTGCTTTCCTGATAGCTGTACATCACTTGTATCTCTTAATTTTGCTTGCCTTAAAGGAGAGGTTAGTTTGGGAGCTCTAGAGAGACTTGTGGCCAGATCTCCTAACCTTAAGAGTTTAAAGCTGAATCGTTCAGTGCCCCTTGATGCACTGCAAAGGATAATGATGCGAGCACCTCAACTTGCGGATTTGGGTATTGGATCATTTGCCCATGATCCAGAATCAGAGGCCTACATAAAGCTTAAGAATACCATTCTCAAGTGCAAGTCTATAACCAGTTTGTCAGGATTTTTGGAAGCTGCTCCTCACTGCCTTGAAGCTATATATCCAATTTGCTCGAACTTAACATCCTTGAACATGAGCTATGCAGCAGGCATTCAGGGCAGTGATCTGATAAAACTAATTCGTCACTGTGTGAAACTTCAGCGCTTATGGATAATGGATTGCATTGGAGACAAAGGACTAAGTGTTGTAGCTATGACATGTAAAGATTTGCAAGAGTTGAGGGTTTTTCCATCTGTTCACTTAGGAAATCCAGCAGCTGTCACAGAAGAAGGGCTGGTTGCAATATCAAAGGGTTGTCCTAAGCTTCACTCATTACTCTACTTCTGCCACCAGATGACAAATGCTGGACTAATTGAAGTGGCTAAGAACTGCCCGAATTTTATCCGCTTCAGGTTGTGTATCCTTGATGCAACAAAACCTGACCCTGATACAATGCAGCCACTGGATGAAGGTTTTGGTGCAATTGTGCAGTCTTGCAGGCGACTCAGGCGCCTGTCACTCTCAGGGCAATTGACTGACCAGGTTTTCCTTTACATTGGAATGTATGCTGAGAAGCTTGAAATGCTTTCTATAGCATTTGCTGGGGAGAGTGACAAGGGAATGGTCTATGTATTGAATGGATGCAAGAAGCTTAGAAAGCTTGAGATAAGAGATTGCCCTTTTGGCAACATGGCACTTCTGACGGACGTAGGGAAGTATGAAACAATGCGATCCCTTTGGATGTCGTCCTGTGAAGTGACCGTAGGAGCCTGCAAGTTGCTAGCCAAGAAGATGCCAAGGCTGAATGTGGAGATCTTCAATGAAAATGAGCAAGAAGATTGTAGTCTGGAAGATGGGCAGAAGGTAGAGAAGATGTATTTGTATCGTACATTGGCTGGGAAAAGGAAAGATGCACCAGAATATGTATGGACTCTGTAGGTGCATTTTAGGTCATTTAATTTCTTGTTATTCAGACGTTTGTACTTGTTGTTAGGCTGACTGATTAATGCAATTTTAGCCGGGTGTAGTGTTTTGTCACTCCTTCCATTTGCTAGTTTTATACATATGCTAGATTGTCTTCATAATGCTACTTCTCTTTCACTACGTATATTATTAGAGTTGGAG 2589 0.4206 MNYFPDEVIEHIFDYVLSHRDRNALSLVCKSWYRIERCTRQRVFIGNCYSITPERLIQRFPGLKSLTLKGKPHFADFSLVPYGWGGFVSPWIEALAKSRVGLEELRLKRMVVSDESLELLSRSFTHFKSLVLVSCEGFTTDGLAAIAANCRFLRELDLQENEVEDHKGQWLSCFPDSCTSLVSLNFACLKGEVSLGALERLVARSPNLKSLKLNRSVPLDALQRIMMRAPQLADLGIGSFAHDPESEAYIKLKNTILKCKSITSLSGFLEAAPHCLEAIYPICSNLTSLNMSYAAGIQGSDLIKLIRHCVKLQRLWIMDCIGDKGLSVVAMTCKDLQELRVFPSVHLGNPAAVTEEGLVAISKGCPKLHSLLYFCHQMTNAGLIEVAKNCPNFIRFRLCILDATKPDPDTMQPLDEGFGAIVQSCRRLRRLSLSGQLTDQVFLYIGMYAEKLEMLSIAFAGESDKGMVYVLNGCKKLRKLEIRDCPFGNMALLTDVGKYETMRSLWMSSCEVTVGACKLLAKKMPRLNVEIFNENEQEDCSLEDGQKVEKMYLYRTLAGKRKDAPEYVWTL 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00808 571 Gene3D Ribonuclease Inhibitor 41 571 IPR032675 -
Pste5g00808 571 FunFam Transport inhibitor response 1 41 571 - -
Pste5g00808 571 CDD F-box_AtTIR1-like 1 40 - -
Pste5g00808 571 FunFam Transport inhibitor response 1 1 40 - -
Pste5g00808 571 Gene3D - 1 40 - -
Pste5g00808 571 SMART fbox_2 4 43 IPR001810 GO:0005515
Pste5g00808 571 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 92 530 - -
Pste5g00808 571 Pfam F-box 2 41 IPR041567 -
Pste5g00808 571 SUPERFAMILY RNI-like 16 531 - -
Pste5g00808 571 Pfam Transport inhibitor response 1 protein domain 61 107 IPR041101 -
Pste5g00808 571 SMART LRR_CC_2 474 499 IPR006553 -
Pste5g00808 571 SMART LRR_CC_2 99 123 IPR006553 -
Pste5g00808 571 SMART LRR_CC_2 333 364 IPR006553 -
Pste5g00808 571 SMART LRR_CC_2 365 389 IPR006553 -
Pste5g00808 571 SMART LRR_CC_2 124 149 IPR006553 -
Pste5g00808 571 SMART LRR_CC_2 425 448 IPR006553 -
Pste5g00808 571 SMART LRR_CC_2 283 308 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00808 Pste-Chr5 5148610 5151816 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00808 5 5148610 5151816 Pste5g00808 5 5148610 5151816 ECH