Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00771 ATGATGAGTGGGGAGTTTGAGGGATACGAGCGGCAATATTGCCAGCTTTCAGCAAATCTATCAAGAACATGCATTACAGCTGCTGCTCTTAATGGAGAGCTAAAGAAACAAAAAATTTCTGAAATAAAGGAGGGAGTGGAGGAAGCAGAGGCTTTGATTAGAAAAATGGACCTTGAGGCAAGAAGTTTACAGCCTGACTTTAAGGCTGTGCTTCTTGCTAAGGTGAGGGAGTACAAAGCAGATCTAAACAACATTAAAAGAGAAGTGAAGAAAATAGTATCTGGTGGCTTAAACCCTTCTGCACATGATGAGTTGTTGGAATCCGGCATTACAAATGTTACGATGAAGGCATCAGCTGATCATAGAGAAAGATTAATAATATCTACTGAAAGGTTGAACAAGTCCAGTGACAGAATTAAGGACAGTAGAAGAACAATGTTGGAAACAGAAGATCTTGGCGTTTCTATTCTACAAGATTTGCATTCACAGAGACAATCTCTACTGCATACGCATGGCACGCTTCATGGAGTGGATGACAACATAGGCAAGAGCAAGAAAATTTTGTCCAGCATGTCAAAAAGGATGTACAGGAACAAGTGGATTTTGAGCACCATTGTTGTGGTCCTGATAGTTGTTATCACCTTGATTCTGTTCTTCAAACTTTCTTAA 669 0.3991 MMSGEFEGYERQYCQLSANLSRTCITAAALNGELKKQKISEIKEGVEEAEALIRKMDLEARSLQPDFKAVLLAKVREYKADLNNIKREVKKIVSGGLNPSAHDELLESGITNVTMKASADHRERLIISTERLNKSSDRIKDSRRTMLETEDLGVSILQDLHSQRQSLLHTHGTLHGVDDNIGKSKKILSSMSKRMYRNKWILSTIVVVLIVVITLILFFKLS 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00771 222 Pfam Snare region anchored in the vesicle membrane C-terminus 130 195 - -
Pste5g00771 222 Gene3D - 2 96 IPR038407 -
Pste5g00771 222 Coils Coil 68 88 - -
Pste5g00771 222 FunFam Vesicle transport through interaction with t-SNAREsB 119 199 - -
Pste5g00771 222 Pfam Vesicle transport v-SNARE protein N-terminus 13 91 IPR007705 GO:0006886|GO:0016020
Pste5g00771 222 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 10 218 - -
Pste5g00771 222 SUPERFAMILY t-snare proteins 7 94 IPR010989 GO:0016020|GO:0016192
Pste5g00771 222 Coils Coil 39 59 - -
Pste5g00771 222 SUPERFAMILY SNARE fusion complex 132 191 - -
Pste5g00771 222 CDD SNARE_Vti1 129 190 - -
Pste5g00771 222 PIRSF Membrin-2 2 220 IPR027027 GO:0005484|GO:0005794|GO:0016192
Pste5g00771 222 Gene3D - 119 199 - -
Pste5g00771 222 FunFam Vesicle transport through interaction with t-SNAREs homolog 1A 2 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00771 Pste-Chr5 4951317 4959896 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00771 5 4951317 4959896 Pste5g00771 5 4951317 4959896 ECH