Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00739 ATGGCGATCAGAGAAGATGTGGAGGATGGCACACCGAAAGGAATCAGAGAGCCACTTGTGAGGGAACAGAACCACCATCTAGTCCATGCAAGTAAAGGGCATCCATGGATGGTTTACTTTAGTACATTTATTGCAGTTTGTGGTTCTTATGAATTTGGGGCTTGTGCTGGATATTCATCTCCCACTCAAGATGCTATCAGGAAGGATCTCAGTCTGTCTTTGGCAGAGTACTCCTTGTTTGGCTCTATCTTGACTTTTGGCGCAATGGTTGGCGCAATAACAAGTGGGTCTATTGCTGATATTATTGGACGAAAAGGAGCAATGAGAGTGTCGAGTGCTTTCTCAGAAATTGCACCGAAAGAACTTCGAGGGAGATTGACTACTTTAAATCAGTTTATGATTGTTGCTGCTGTGTCTGTGTCATTCATAGTCGGAAATGTACTTTCATGGAGGGCTTTAGCTTTAATTGGCCTCATTCCCACTGCCGTATTGCTTTTGGGTCTATTTTTCATTCCAGAGTCTCCTAGATGGCTAGCAAAGAGAGGATATAAAAAAGATTTTGAGGCAGCACTGCAGATACTTCGTGGGAAAGATGCTGATATATCTGAGGAGGCAGAGGAAATTCAGGACTATATAACTACATTGGAGCGGCTTCCAAAATCCAGGCTGCTGGAATTGTTTCATAGAAGATATTTGCGCTCAGTCACTATTGGCATAGGCCTTATGGTCTGCCAGCAGTTTGGTGGAATCAATGGAATTTGCTTTTATGCCAGCAGCATTTTTGAGCTAGCAGGATTTTCTCCTACCATCGGGACTATAACATATGCTTGCCTTCAGATTGTGATCACAGGTCTTGGAGCAGCCTTGATAGATAAAGCTGGCAGGAAGCCGCTACTGCTATTATCTGGATCAGGATTGGTCGCAGGATGTATGTTTGCAGCAGTTGCATTCTATCTCAAGGTTCACGAGGTAGGCGTTGCGGCAGTCCCAGCACTTGCGGTAACAGGAATACTGGTCTACATAGGATCATTTTCAATAGGAATGGGAGCAATTCCATGGGTTGTGATGTCTGAGATATTTCCTGTCAATGTTAAAGGGCTAGCGGGAAGTGTGGCCACATTAACGAACTGGTTTGGTGCATGGTTATGTTCCTATACTTTCAACTTCCTCATGAGCTGGAGCTCCTATGGTATAACAATTGCAGAGATAGTGGATATGACAGATGGTGAAAGTGGTGATTACAATCAGACGATGAAAGAAGATGTGAAAGGCACGCGGAAAGGAGTGAGAGAGCCACTTGTGGGGGAGCAAGGCCATCAACTGGTCCAAGCAAGCAAAGGGCATCCATGGATGGTTTACTTTAGTACATTCGTTGCAGTGTGTGGTTCTTATGAATTTGGAGCTTGTGCTGGATATTCATCTCCCACTCAAGATGCTATCAGGAAGGATTTCAGTCTGTCTTTGGCAGAGTCCTTGTTTGGCTCCATCTTGACTTTTGGCGCGATGGTTGGTGCAATAACAAGTGGGCCTATCGCTGATTTTATTGGACGAAAAGGGGCAATGAGAGTGTCAAGTGCTTTCTGTGTCACAGGGTGGCTTGTTATTTACTTTTCTAAGGGTCCAGTGTCTTTGGACATTGGGAGGCTGGCTATAGGATATGGAATGGGAGTTTTTTCATATTTCATGATCACTGCTGCTGTGTCAGTGTCATTCACAATTGGAAATGTACTTTCATGGAGGGCTTTAGCTTTAATTGGTGAGTCTTCCTTATTTGAAGCAAATTCTAACAGTAAGGCAAAGAGAGGACGTCAAAAAGATTTTGAGGCAGCACTGCAGATACTTCGTGGGAAAGATGCTGATATATCTGAGGAGGCAGAGGAAATTCAGATTGTGATGACAGGTCTCGGAGCAGCCTTGATAGATAAAGCTGGCAGGAAGCCCCTACTTCTAGTTCACGAGGTTGGTGTTGCGGCAGTCCCAACACTTGCTGTAACAGGCATTCTGGTCCACATAGGATCGTTTTCAATAGGAATGGGAGCCATTCCATGGGTTGTGATGTCTGAGATATTTCCTGTCAAAATCGAAGGGCTGGCAGGAAGTGTAGCCACATTAGTGAACTGGTTTGGTGCATGGTTATGTTCGTATACTTTCAACTTCCTCATGAGTTGGAGTTCCTATGGTACCCTCATTCTTTATGCAGCAATTAATGCACTGGCCATATTATTTATAATTGTTGCGGTGCCAGAAACGAAGGGGAAAAGCTTGGAACTATTACAAGCAACCATTAACTCATAGGAAGCAGGGGCTGTGATTTGCTGAACAGTGTATGGTGGAAAAAAAGAAAGAAAAAACTGACGCAGTTTCGTGATTGAATCATCACTAGCCATATTTGTTGTCGTAGTATTTCTTCTTTATTGATGATTGAATATGTTCTCAAGGTTTAGTTTTCAAATTTGTTCTCTTAATGTCAATGATTTAACGAAGCATATATCCAAGG 2497 0.4341 MAIREDVEDGTPKGIREPLVREQNHHLVHASKGHPWMVYFSTFIAVCGSYEFGACAGYSSPTQDAIRKDLSLSLAEYSLFGSILTFGAMVGAITSGSIADIIGRKGAMRVSSAFSEIAPKELRGRLTTLNQFMIVAAVSVSFIVGNVLSWRALALIGLIPTAVLLLGLFFIPESPRWLAKRGYKKDFEAALQILRGKDADISEEAEEIQDYITTLERLPKSRLLELFHRRYLRSVTIGIGLMVCQQFGGINGICFYASSIFELAGFSPTIGTITYACLQIVITGLGAALIDKAGRKPLLLLSGSGLVAGCMFAAVAFYLKVHEVGVAAVPALAVTGILVYIGSFSIGMGAIPWVVMSEIFPVNVKGLAGSVATLTNWFGAWLCSYTFNFLMSWSSYGITIAEIVDMTDGESGDYNQTMKEDVKGTRKGVREPLVGEQGHQLVQASKGHPWMVYFSTFVAVCGSYEFGACAGYSSPTQDAIRKDFSLSLAESLFGSILTFGAMVGAITSGPIADFIGRKGAMRVSSAFCVTGWLVIYFSKGPVSLDIGRLAIGYGMGVFSYFMITAAVSVSFTIGNVLSWRALALIGESSLFEANSNSKAKRGRQKDFEAALQILRGKDADISEEAEEIQIVMTGLGAALIDKAGRKPLLLVHEVGVAAVPTLAVTGILVHIGSFSIGMGAIPWVVMSEIFPVKIEGLAGSVATLVNWFGAWLCSYTFNFLMSWSSYGTLILYAAINALAILFIIVAVPETKGKSLELLQATINS 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00739 764 PRINTS Sugar transporter signature 334 355 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste5g00739 764 PRINTS Sugar transporter signature 357 369 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste5g00739 764 PRINTS Sugar transporter signature 245 255 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste5g00739 764 ProSitePatterns Sugar transport proteins signature 1. 508 525 IPR005829 GO:0016020|GO:0022857|GO:0055085
Pste5g00739 764 Gene3D MFS general substrate transporter like domains 115 404 IPR036259 -
Pste5g00739 764 Gene3D MFS general substrate transporter like domains 443 572 IPR036259 -
Pste5g00739 764 Gene3D MFS general substrate transporter like domains 37 114 IPR036259 -
Pste5g00739 764 SUPERFAMILY MFS general substrate transporter 449 570 IPR036259 -
Pste5g00739 764 ProSitePatterns Sugar transport proteins signature 1. 286 303 IPR005829 GO:0016020|GO:0022857|GO:0055085
Pste5g00739 764 CDD MFS_GLUT6_8_Class3_like 39 397 IPR044775 GO:0008643|GO:0051119
Pste5g00739 764 Pfam Sugar (and other) transporter 634 759 IPR005828 GO:0016020|GO:0022857|GO:0055085
Pste5g00739 764 Pfam Sugar (and other) transporter 111 396 IPR005828 GO:0016020|GO:0022857|GO:0055085
Pste5g00739 764 Pfam Sugar (and other) transporter 464 561 IPR005828 GO:0016020|GO:0022857|GO:0055085
Pste5g00739 764 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 751 IPR020846 GO:0022857
Pste5g00739 764 SUPERFAMILY MFS general substrate transporter 42 399 IPR036259 -
Pste5g00739 764 SUPERFAMILY MFS general substrate transporter 629 756 IPR036259 -
Pste5g00739 764 Gene3D MFS general substrate transporter like domains 627 763 IPR036259 -
Pste5g00739 764 PANTHER - 32 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00739 Pste-Chr5 4786208 4799761 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00739 628 763 Organic Solute Cotransporters AT5G18840 50.000 8.87e-42 157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00739 5 4786208 4799761 Pste5g00739 5 4786208 4799761 ECH