Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00710 GGGTTAGAAACCTTACAATTTATTATCCCAACCAGTGTATTCAGTGGCCTCTTTTGCAATGAAGCAATTGTGGAGACTCTATACAGATGCAACGCAAGCTCAATTATCACTCTTTGAATCCCGTTTTTATAGATTCTCAAAGGTCAAGACCATTCCTTCCTTTACCGCCACCCTATCTTATCGCATGGTCAATACCGTGTCAGGCAATGTCTCTGACCTTGTTACCTTATTCACTGCCAAGAGGAGCACTGGCTCTTCCTCCAAAGAGGATCTCATCAACCAGGTCATGATTCTCAGTAACAAGCTCAGTTTGGTATCCTCGGACTCTGCTCGAGTTTGCAGCATTTTGGATGAAAATTTTGACCCATTGAATTGGTGCTCCCCCAATGGAAATGTGGTGGTCATGCTTATGAATCAATTGAATTCCAATCCTTCCCTTGCTCTCCAGGTGTTTAGTTGGAGAAGAAATAGATCTAATGTTGAAAATCCTATGGATACGTATGAGTACTCAAAGGGTATAAAAGCTGCAGGTAGATCTGGGAATATTGATTTAGCTGTTAAGCTCTTTCAGGAGGCTGCTGTCAAAGGTATCCAGACAACTAGCACGTACAATGCGCTCATGGGTGCTTTTATGTTCAATGGTCATGCCGAATGCTGCCAGTCCTTGTTTTGTGATTTGAAAAGGAATCCAACTTGCGAACCTTCTATTGCCACATATAATATTCTTCTATCTGTTTTTGGTAGGTCAATGCTTGTTGATCACGTGGAAGCAATATTCAATGAGATACAGAAGTTAAACCTAGCCATGAACATCAGCACTTATAATTACTTGATTGGTGGATATCTGACGGCTTGGATGTGGGATGATATGGAAAAGGTGTTTCAATTGTTGAAGTCGGGCCCAGTGGAGCCTAACATGAAAACCTACCTGCTAATGCTTCGAGGGTATGCAAATTCGTGTAATCTGGAAAAGATGGAAGAGATATATTCCCTTATAAGGTATCATGTAAATAACAATGAAATTCCATTAATCAGATGTATGATATGTGCCTATAGCAAAAGTTCCAAAGCAGATAGATTTAAGAAGATAGAGTTATTGTTGAAGTTTATTCCAGAAAAAGAGTACTGCCCATGGTTAAATGTTTTGTTGATTAAACTCTACGCCAACCAAGACTGGTTAGAGAAAATGGAAAATGCTATAAATGAGGCATTTGAGCATGGAACCTGCGTAACAACCAAGGGTGTTATGAGGTGTATAATTGCAACTTATTATCGGTGCAATGCGGTAGAAAAGCTAGAAAATTTTTTGAGACGTGCTGAAATCTCTGGGTGGAGTATCTGCCGGTCCTTATATCATTGTAAGCTGGTTATGTATGGGTCTCGCAAACCCTTACATGAAATGCATGATGTCCTTGTGGAGATGGAAAATGTCAGGCTTCATTGTACAAAGAAAACATTATGGATAATGTACAAAGTTTACACGAGTCGTGGCCAAAGTTCCATGGTTTTAAAAACATTGGGCCAAATGTTCAAGCATGGTCATGAAGTTCCTTTGGCTGCATTTCCATCATGA 1573 0.4005 MKQLWRLYTDATQAQLSLFESRFYRFSKVKTIPSFTATLSYRMVNTVSGNVSDLVTLFTAKRSTGSSSKEDLINQVMILSNKLSLVSSDSARVCSILDENFDPLNWCSPNGNVVVMLMNQLNSNPSLALQVFSWRRNRSNVENPMDTYEYSKGIKAAGRSGNIDLAVKLFQEAAVKGIQTTSTYNALMGAFMFNGHAECCQSLFCDLKRNPTCEPSIATYNILLSVFGRSMLVDHVEAIFNEIQKLNLAMNISTYNYLIGGYLTAWMWDDMEKVFQLLKSGPVEPNMKTYLLMLRGYANSCNLEKMEEIYSLIRYHVNNNEIPLIRCMICAYSKSSKADRFKKIELLLKFIPEKEYCPWLNVLLIKLYANQDWLEKMENAINEAFEHGTCVTTKGVMRCIIATYYRCNAVEKLENFLRRAEISGWSICRSLYHCKLVMYGSRKPLHEMHDVLVEMENVRLHCTKKTLWIMYKVYTSRGQSSMVLKTLGQMFKHGHEVPLAAFPS 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00710 504 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 251 285 IPR002885 -
Pste5g00710 504 NCBIfam pentatricopeptide repeat 219 251 IPR002885 -
Pste5g00710 504 Gene3D Tetratricopeptide repeat domain 326 501 IPR011990 GO:0005515
Pste5g00710 504 Pfam PPR repeat family 181 227 IPR002885 -
Pste5g00710 504 Pfam PPR repeat family 251 299 IPR002885 -
Pste5g00710 504 Gene3D Tetratricopeptide repeat domain 81 245 IPR011990 GO:0005515
Pste5g00710 504 Gene3D Tetratricopeptide repeat domain 246 316 IPR011990 GO:0005515
Pste5g00710 504 PANTHER EXPRESSED PROTEIN 41 502 IPR044179 GO:0003729
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00710 Pste-Chr5 4609652 4611525 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00710 150 314 Miscellaneous Gene Families AT4G11690 25.904 2.10e-10 61.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00710 5 4609652 4611525 Pste5g00710 5 4609652 4611525 ECH