Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00695 CTTTCACAATTCCACAGCGCAGAGTAAAAATCTACAAATTTCTTCAAAATTGAAATCAACCACCATGAGTTCTTCCGAGGCCGGAGCCACAACAAAGAAGGGTGGAAGGGGCCAAACCAAGACCAAGTCCGTTTCCCGTTCCTCCAAAGCCGGCCTTCAATTCCCCGTCGGCCGCGTCGCTCGCTACCTCAAGGCTGGTCGCTATGCCCAGCGCGTTGGCTCTGGTTCCCCTGTTTACCTCTCTGCAGTTCTCGAATACCTTGCTGCTGAGGTTTTGGAGCTTGCCGGAAACGCTGCCAGGGACAACAAGAAGACGAGGATTGTTCCCAGACACATTCAATTGGCTGTCAGGAACGATGAGGAATTGAGCAAGCTGTTGGGGTCTGTTACTATTGCCAGCGGTGGTGTTCTGCCTAACATTAACCAGAACTTGTTGCCTAAGAAGAATGCTGCCAAAGGAAAAGCCGAGATTGGGTCTGCCAGTCAAGAGTTTTAGATATTTACAATTAGGTTTAGATTCGAAATGTAAAAGCTAATGTTTTGTTATGTAGTTGGTTACGTGATATATAAGAGTAGGATTGGGATTCGATTATGTATAGTCCTTTCTTTTGTGAAAATAATTTTTTTTTTCTAATTTTGGTTTAGGATGTCGGATGCATTTGTTAGTCGTTTACTTTTTTGTTGACTACGCGTTGATGGTTTTCATCTGCTAATTTGATAACTGTAACGTGATTGTGATTGCTGCTAATAATGTGGTGTGAGGTTATAATGGTAAATTGGTG 782 0.4361 MSSSEAGATTKKGGRGQTKTKSVSRSSKAGLQFPVGRVARYLKAGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIASGGVLPNINQNLLPKKNAAKGKAEIGSASQEF 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00695 143 FunFam Histone H2A 6 135 - -
Pste5g00695 143 SUPERFAMILY Histone-fold 24 127 IPR009072 GO:0046982
Pste5g00695 143 Gene3D Histone, subunit A 7 135 IPR009072 GO:0046982
Pste5g00695 143 Pfam Core histone H2A/H2B/H3/H4 17 96 IPR007125 GO:0003677
Pste5g00695 143 PANTHER HISTONE H2A 16 128 IPR002119 GO:0000786|GO:0003677|GO:0030527
Pste5g00695 143 SMART h2a4 10 130 IPR002119 GO:0000786|GO:0003677|GO:0030527
Pste5g00695 143 ProSitePatterns Histone H2A signature. 29 35 IPR032458 -
Pste5g00695 143 MobiDBLite consensus disorder prediction 1 28 - -
Pste5g00695 143 PRINTS Histone H2A signature 21 43 IPR002119 GO:0000786|GO:0003677|GO:0030527
Pste5g00695 143 PRINTS Histone H2A signature 79 93 IPR002119 GO:0000786|GO:0003677|GO:0030527
Pste5g00695 143 PRINTS Histone H2A signature 50 65 IPR002119 GO:0000786|GO:0003677|GO:0030527
Pste5g00695 143 PRINTS Histone H2A signature 107 125 IPR002119 GO:0000786|GO:0003677|GO:0030527
Pste5g00695 143 PRINTS Histone H2A signature 65 78 IPR002119 GO:0000786|GO:0003677|GO:0030527
Pste5g00695 143 Pfam C-terminus of histone H2A 99 133 IPR032454 -
Pste5g00695 143 CDD H2A 14 127 IPR002119 GO:0000786|GO:0003677|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00695 Pste-Chr5 4487750 4488612 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00695 5 4487750 4488612 Pste5g00695 5 4487750 4488612 ECH