Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00453 ATGGGGTCCATTTTTGGATTGTGCTTGCTCACGTTCCTGTTGTTCTCCCCAGCTGCATTTTCGGAACTGTGCAACCCACAGGACAAGAAAGTCCTGCTACAAATCAGAAAACACTTCAACAACCCTTACTTGCTAGCTTCATGGAACCCCGACACCGATTGCTGTCACTGTGCCCGAATTCTTGGCCCAACTTACAAACCTCCAGTTTCGGACTCATTTGGTTCCTTCAAGAAACCAGGCCCAAGTCTTCTCCTATCCCACAACCAACTATCGGGGCCCATTCCAGCTTCCCTGGCCAACATAGACCCACAAACGATAGACTTGTCGAGGAACAAACTGGAAGGTGACGCCTCCGTGCTTTTCGGGAGAAACAAAACGACGCAGACGGTTGACGTTTCGAGGAACTTGTTGGCTTTTGATTTATCCAAAGTGGAGTTCCCCAGCAGCTTGATATCGTTGGATTTGAATCACAACAAGATCACCGGGAGCATTCCCATGGGATTGACCGCAGTGGATTTTTTGCAGGGGTTCAATGTGAGCTATAATCGGCTGTGTGGTGAGATACCGCAGGGTGGAAGAATGCAAAAGTTTGATGTGTATTCCTATTTTCACAACAAGTGTTTGTGTGGCTCTCCCCTTCCCACTTGTCAAATTAAGGACGGAAATTAG 669 0.4783 MGSIFGLCLLTFLLFSPAAFSELCNPQDKKVLLQIRKHFNNPYLLASWNPDTDCCHCARILGPTYKPPVSDSFGSFKKPGPSLLLSHNQLSGPIPASLANIDPQTIDLSRNKLEGDASVLFGRNKTTQTVDVSRNLLAFDLSKVEFPSSLISLDLNHNKITGSIPMGLTAVDFLQGFNVSYNRLCGEIPQGGRMQKFDVYSYFHNKCLCGSPLPTCQIKDGN 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00453 222 Pfam Leucine rich repeat N-terminal domain 26 55 IPR013210 -
Pste5g00453 222 Gene3D Ribonuclease Inhibitor 22 65 IPR032675 -
Pste5g00453 222 Gene3D Ribonuclease Inhibitor 66 217 IPR032675 -
Pste5g00453 222 SUPERFAMILY L domain-like 71 215 - -
Pste5g00453 222 PANTHER POLYGALACTURONASE INHIBITOR 1 9 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00453 Pste-Chr5 2956545 2957324 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00453 106 212 Miscellaneous Gene Families AT1G74190 39.815 1.20e-15 73.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00453 5 2956545 2957324 Pste5g00453 5 2956545 2957324 ECH