Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00302 ATGAGTACCAGTAGTTTCGAGATACTCCACGTGTCAGAATCTGGATGCACGGGAAGCCTCTGGTATGCTATAAAAGCGACGCTCCTTACTGCGTTGTTTTCATATCATACACTAAAGCTTGTGAAGCTACTGATCATCAAGCAGGGGCTGAGAGCGTTGCTTCGTGCTTCCATTTTCTTCCATTGGAGGACCATTTCCTCCTGGAATAGAAACACTACACTATTTTCACTTCTTCAAGTTAAGAAGATGATGCTAAAGACAACATCAATTCAGTCCCCAAAGTGGATTCCTCCTTCGCGTGAACCACTGGTGAAGTGTTCGAAAATGACTGTGACACCTATGATCTCTGTTAATGATGGGAAACTTGTTGTTCATGGCAAGACCATATTGACTGGAGTGCCGGACAACGTTGTGCTGACTCCAGGTTCTGGAAGGGGCCTTGTGACGGGTGCTTTCGTTGGTGCAACAGCTTCCAACACCAAAAGTCTCCATGTGTTTCCAATGGGTGTCTTAGAGGGGCTTCGATTCATGTGTTGTTTCCGATTCAAGTTATGGTGGATGACTCAGAGAATGGGAACCTGTGGAAGAGATGTTCCTCTGGAGACACAATTCATGCTCATTGAGAGTAAAGAGAGTGACGTGGATAGGGAGAATTCTCCCATCATCTACACTGTCTTGCTTCCTCTCCTAGAAGGTCAATTTCGGGCTGTTCTTCAAGGAAATGACAAAAACGAGATAGAGATTTGCCTCGAGAGTGGGGATACTGACGTTGAGACTGACCAAGGCCTTCACATGGTCTACATGCATGCTGGGACGAACCCTTTTGAAGTCATCAATCAAGCTGTCAAGGCTGTGGAAAAACACATGCAAACTTTTGTTCATCGTGAGAAGAAAAGGTTGCCGTCTTTCCTTGACTGGTTTGGCTGGTGCACATGGGATGCTTTCTATACTGACGTCACAGCTGAGGGTGTTGAGGAAGGCCTGAAAAGTCTCTCAAAGGGAGGCACACCTCCACGGTTCCTCATCATAGATGATGGTTGGCAACAGATTGAAAATAAAGCAAAGGATGTAGATTGTGTCGTACAAGAAGGAGCACAGTTTGCCACTAGGTTGACTGGTATTAAAGAGAATACTAAATTTCGAAAGAGTTCACAGAACGATGAGCACATATCAGGTCTGAAGCATCTAGTGGATGGAGCAAAGCAGCATCACAATGTGAAAAATGTTTATGTATGGCATGCACTAGCTGGTTATTGGGGTGGAGTGAAGCCAGCAGCAACTGGAATGGAACATTATGACACTTCCCTGGCATATCCAGTGCAGTCACCAGGTGTACTAGGAAACCAACCAGACATTGTCATGGACAGCTTGGCTGTACATGGCCTTGGCCTAGTGCACCCAAAGAAGGTTTTCAATTTCTACAATGAGCTCCATGCCTACTTAGCTTCGTGTGGAGTAGATGGAGTGAAGGTTGATGTGCAGAACATTATTGAGACCCTTGGTGCTGGGCATGGTGGCAGAGTCTCACTTACACGCAGCTATCATCATGCACTTGAGGCCTCCATTGCCCGTAACTTTGCTGACAATGGATGTATTGCGTGTATGTGTCACAACACTGACGGGCTTTATAGTGCCAAGCAGACTGCTATCGTGAGAGCATCTGATGATTTTTACCCGCGTGATCCTGCTTCCCACACCATCCATATTTCATCTGTTGCATACAACTCACTTTTTCTAGGAGAATTCATGCAACCTGACTGGGACATGTTTCATAGTTTACACCCAGCAGCAGAATATCATGCTGCAGCCCGCGCAATTGGTGGATGCCCAATTTATGTTAGTGACAAGCCAGGCAACCACAATTTTGATCTTCTTCAAAAGATGGTTCTGCCTGATGGTTCAGTTCTTCCTGCTCAGTTACCTGGCAGGCCAACTCGTGACTCTCTCTTTTCTGATCCAGCAAGAGATGGGACTAGCCTGCTCAAAATATGGAATCTAAACAAATGCTCTGGAGTTGTTGGTGTATTTAACTGCCAAGGTGCTGGATGGTGCAAGATAGAGAAGAAAACCCGCATCCATGATACATCTCCTGGTACACTCACTGGCTCTGTTCGCGCCTCTGATGTTGACCTCATCACCCAAGTAGCAGGTGCTGAGTGGCTCGGAGAGACAATTGTTTATGCTTACAGATCAGGTGAGGTGATTCGACTACCAGAAGGGGTTTCACTTCCAGTGACACTGAAAGTTCTGGAGTTCGAGCTTTTCCACTTCTGTCCAATCCATGAAATAGAACCAACTATTTCATTTGCAGCAATAGGGCTACTGGATATGTTCAACACTGGAGGAGCAGTGGAGCAGGTTGATATTCATAGAACCTCTAACAACAAACCAGAGATATTTGACGGTGAAGTGTTCTCAGAACTGACTTCTTCTATGAGCCCTAACCGAGCAGCAGCAACAGCAATTATTACTCTTAGAGTCAGGGGAAGGGGAAGATTTGGAGTTTACTCTTCCCAGCGACCCCTGAAGTGTGTGGTAGGTGGCACTGAAAATGACTTCAACTATGACTCGGAGACTGGCTTGACAACCTTCTACATCCCAGTTCCTCCAGAGGAGATGTACAGATGGTCAATTGAGATCCAAGTTTGAGACCTTTAGGAGATGGAGTTTGATTAACTGTTGTGTCAAAGAGGGTTTTGTTGTGATTAACATTGAGGGAATTGTCGTTGGAGTCAGGCAGAGGTGGTTTTGTTGTAATAACTAGACATGGGGTGCAGAAAATGGGTTGATCCTAAGAACTGGAATAGCAGACTAGGGACCTTTCAGTAGACATTGGCGGGAAGAAGTGCATTACTGCATTTGTTGTAACTTGTAATGCATCATGCATGTAGTATTAGCATGAGAATAGCATGTCATGAATGGGGGAATAATGTTTTCTACCCAGGTTGTAACATGTTTGTTTCTCTGAATAAAAAGTTCTCATCTGTTTGAAAAATCTCCAATGAATTTATGTTGTTCATGAACTAGGAAAAAGACAATTTGGATCCGTGTTTGTAATGTGACTAAAACCAGTATAACAGCAAATGCAAGTTGATGTTTGGTGAGGAG 3108 0.4479 MSTSSFEILHVSESGCTGSLWYAIKATLLTALFSYHTLKLVKLLIIKQGLRALLRASIFFHWRTISSWNRNTTLFSLLQVKKMMLKTTSIQSPKWIPPSREPLVKCSKMTVTPMISVNDGKLVVHGKTILTGVPDNVVLTPGSGRGLVTGAFVGATASNTKSLHVFPMGVLEGLRFMCCFRFKLWWMTQRMGTCGRDVPLETQFMLIESKESDVDRENSPIIYTVLLPLLEGQFRAVLQGNDKNEIEICLESGDTDVETDQGLHMVYMHAGTNPFEVINQAVKAVEKHMQTFVHREKKRLPSFLDWFGWCTWDAFYTDVTAEGVEEGLKSLSKGGTPPRFLIIDDGWQQIENKAKDVDCVVQEGAQFATRLTGIKENTKFRKSSQNDEHISGLKHLVDGAKQHHNVKNVYVWHALAGYWGGVKPAATGMEHYDTSLAYPVQSPGVLGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHHALEASIARNFADNGCIACMCHNTDGLYSAKQTAIVRASDDFYPRDPASHTIHISSVAYNSLFLGEFMQPDWDMFHSLHPAAEYHAAARAIGGCPIYVSDKPGNHNFDLLQKMVLPDGSVLPAQLPGRPTRDSLFSDPARDGTSLLKIWNLNKCSGVVGVFNCQGAGWCKIEKKTRIHDTSPGTLTGSVRASDVDLITQVAGAEWLGETIVYAYRSGEVIRLPEGVSLPVTLKVLEFELFHFCPIHEIEPTISFAAIGLLDMFNTGGAVEQVDIHRTSNNKPEIFDGEVFSELTSSMSPNRAAATAIITLRVRGRGRFGVYSSQRPLKCVVGGTENDFNYDSETGLTTFYIPVPPEEMYRWSIEIQV 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00302 882 Pfam Raffinose synthase or seed imbibition protein Sip1 115 865 IPR008811 -
Pste5g00302 882 SUPERFAMILY (Trans)glycosidases 303 627 IPR017853 -
Pste5g00302 882 Gene3D Aldolase class I 305 627 IPR013785 -
Pste5g00302 882 PANTHER - 109 880 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00302 Pste-Chr5 2036543 2043019 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00302 109 664 Glycoside Hydrolase AT3G57520 82.047 0.0 984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00302 5 2036543 2043019 Pste5g00302 5 2036543 2043019 ECH