Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00167 TGACTTTCCTAAACCAGTGACGCAAGAATTGAATTGAACTGAACAGTTACCTCTGCAACATAAATACCCAGGCAAGAAGAGGTTGAGTTGAATTTGAACACTGAAGAATGGTAAATCCTTTTGAGTTGTGAAACCCTAGACTAGAGCCATGTCTGACGCCTTTTGCAGCGACTGCAAGAAGCAAACCGAGGTGGTCTTCGACCACTCCGCCGGGGACACCGTCTGTTCCGAGTGCGGCCTCGTCTTGGAGTCTCACTCCATCGACAAAACCTCCGAGTGGCGCACCTTCGCCAATGAGTCCGGCGACAACGACCCCGTCCGTGTGGGTGGCCCCACCAACCCTCTCCTCACCGACGGCGGTCTCTCCACCGTCATCGCCAAGCCCAACGGCGCCTCCGCCGAGTTCCTCTCCTCCTCCCTCGGCCGCTGGCAGAACCGCGGCTCCAACCCCGACCGCGGCCTCATCGTCGCCTTCAAAACCATCGCCACCATGTCCGATAGGTTGGGACTCGTTGCCACCATCAAGTTTGCCATCATTTTTTGGTCTCACCATCAAGGCAATCAAATTCCGTTCAACTTTGAGATAACTTGTATGGATTTCTCAATTTGCCCTGTTTACTTTTTCACCCAACTTGGGATTATAGAACAATGGAAAAAGCTGTTTGATAATGCTGCTGTTGAGTTTCTCTTCCCGTGGTCAGTGTTGATATTGGTGTTATGTACCTCCATGCCTCCGAGAGTCTTCGACCCGAAAGGGAATGTTTGGATTGGTGGTATAGGATGGAACGGAGAGGGATGGAGTGGAAGGGAAAATTGTTCTATTGTTTGGATTGTAAAAATAGAACGGATAGTTCCATTGTTTAACCCCAATTTTCCTCTGCCAAAATTTGGGGATCGGGCTAATGAGATATATAAACGGGTTGAAGATCAGAAGTCTAGTAGGGGAAGAAATCAGGATGCATTATTGGCTGCCTGCCTCTACATTGCTTGTCGACAAGAAGACAAGCCACGCACTGTAAAGGAAATTTGCTCTGTTGCCAATGGAGCCACAAAGAAGGAAATTGGCCGAGCGAAAGAATACATAGTGAAACAACTGGGCTTAGAGCAGGGTCAATCTGTAGAGATGGGAACAATACATGCTGGGGACTTTATGAGACGTTTTTGTTCAAATCTTGGTATGAATAATCAAGCTGTTAAAGCTGCTCAAGAAGCTGTTCAGAAATCAGAAGAATTTGATATAAGGAGGAGTCCCATATCAATCGCTGCAGCAGTTATATACATCGTAACCCAGCTTTTGGATGATAAAAAACCCCTGAAAGATATATCAGTTGCCACAGGAGTTGCAGAAGGAACCATTAGGAACTCGTACAAGGATCTTTATCCCCATGTTTCAAAAATAATTCCTGGTTGGTATGCAAAAGAAGAAGATTTAAAGAACCTATGCAGCCCTTAAAGCAAAGCAATAGCGACCACATCTGACAACTTTAGATGCCACTGGAACGTTCTGTTCTGGATGTACTGAACTGTTTTATACTTTTAATTCAAAATGAAAATGCCTCTTTTGTGATTTATTTATTTTTCTTCTTTTTGGTATTTTCCTTGTAGTAGTTAACTGCACATTCATTTTGGTTTACCCTCCCAAGTTGAGAATTCCAGGGGAGAGGTACTGCTCATATATAAAATTAACTTAACCTTTATGGTAGTAAGTTTATTTTGTAATTCCAGTGAAAAAAAAGTTTATTTTGTAATTGCGATGAAATCACACGGGGCCATATAGGTT 1780 0.4427 MSDAFCSDCKKQTEVVFDHSAGDTVCSECGLVLESHSIDKTSEWRTFANESGDNDPVRVGGPTNPLLTDGGLSTVIAKPNGASAEFLSSSLGRWQNRGSNPDRGLIVAFKTIATMSDRLGLVATIKFAIIFWSHHQGNQIPFNFEITCMDFSICPVYFFTQLGIIEQWKKLFDNAAVEFLFPWSVLILVLCTSMPPRVFDPKGNVWIGGIGWNGEGWSGRENCSIVWIVKIERIVPLFNPNFPLPKFGDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEQGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEFDIRRSPISIAAAVIYIVTQLLDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWYAKEEDLKNLCSP 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00167 434 PRINTS Transcription initiation factor IIB signature 19 39 IPR000812 GO:0006352|GO:0070897
Pste5g00167 434 PRINTS Transcription initiation factor IIB signature 274 293 IPR000812 GO:0006352|GO:0070897
Pste5g00167 434 PRINTS Transcription initiation factor IIB signature 301 316 IPR000812 GO:0006352|GO:0070897
Pste5g00167 434 PRINTS Transcription initiation factor IIB signature 334 352 IPR000812 GO:0006352|GO:0070897
Pste5g00167 434 PRINTS Transcription initiation factor IIB signature 398 412 IPR000812 GO:0006352|GO:0070897
Pste5g00167 434 PRINTS Transcription initiation factor IIB signature 41 54 IPR000812 GO:0006352|GO:0070897
Pste5g00167 434 PRINTS Transcription initiation factor IIB signature 366 382 IPR000812 GO:0006352|GO:0070897
Pste5g00167 434 SUPERFAMILY Cyclin-like 231 318 IPR036915 -
Pste5g00167 434 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 4 431 IPR000812 GO:0006352|GO:0070897
Pste5g00167 434 Gene3D - 232 316 - -
Pste5g00167 434 Pfam TFIIB zinc-binding 6 47 IPR013137 -
Pste5g00167 434 ProSiteProfiles Zinc finger TFIIB-type profile. 2 34 IPR013137 -
Pste5g00167 434 SMART cyclin_7 229 314 IPR013763 -
Pste5g00167 434 SMART cyclin_7 333 412 IPR013763 -
Pste5g00167 434 Pfam Transcription factor TFIIB repeat 326 412 IPR013150 GO:0017025
Pste5g00167 434 Pfam Transcription factor TFIIB repeat 248 307 IPR013150 GO:0017025
Pste5g00167 434 SUPERFAMILY Zinc beta-ribbon 4 50 - -
Pste5g00167 434 SUPERFAMILY Cyclin-like 329 430 IPR036915 -
Pste5g00167 434 Gene3D - 5 131 - -
Pste5g00167 434 Gene3D - 330 433 - -
Pste5g00167 434 CDD CYCLIN_TFIIB_rpt1 249 317 - -
Pste5g00167 434 ProSitePatterns Transcription factor TFIIB repeat signature. 266 281 IPR023486 -
Pste5g00167 434 FunFam Transcription initiation factor IIB 330 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00167 Pste-Chr5 1265058 1269665 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00167 5 1265058 1269665 Pste5g00167 5 1265058 1269665 ECH