Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00100 TCTCTTCTTCCTTTGTTGCAACTGTTCTTTCTTCTCTCTCTTTCCTCCTTTGGTCTTTGTATGTTACTATATTATATATGTTAGAGTTCTTGCCTCGGGGGCGTTTCTCTTCTTAATATCTGAGTAAATATGCACAAACCCATGTCTCGAAATCTTCACTTTCCCTTCTGAATCCATCTGGGGTCTTTGTCTCTTTCGTAGCATGTTTGCGTGTTGATTATTCTCTATGAACGTTGATAGGTCAACCAACTTCTCATGATGTGAAGCTTTTTAGTGCTTGTGTTTGGGGGGCGTCTTTCATCAGGTTACAGGCAATTGCATTGGGTATAAGGGGGGGACACATTGAAGGAGCATTTGTCTTGAAAAGACCTATTATGACTAGTAAAAAGCCATTACCTGTCCCAACCTTTGTTAGTGACTTTTGCTTCAGTTACCGTAGTTCCCAAAAGATGAGAGTTCTGGAGTTACCACCCTCTGATGGCAATGGTTCCTCTACTAATGAAGATGAACCTAGACCTCAGGATGCAGATTATAGTAATGTTCTGAGTCTTAGTGATGAGTTAGAGACTTCAATCTTGGCAAGATTTCCAAGATCACAGCAGTGGAAATTGTGCTTTCTAAATAAGCGGTTCTTGGCTTTAGCAAGGAGTGGTGAGATCTATAAAATAAGGAGAGAGTTAGGGTTGAAAGAACCTTCAGTGTTCATGCTAGCTAGTGGGGAGAGCTATTGGTGGGGGATGGAGTGGCCTTTCAAGTCAAGCAGGAAGCTCCCTCCTATTCACTCAGACTATAATTTTGAGTATGGGGATAAGGAGTCATTTTGTGCAGGGTCCCACCTATTAGTCTCTGGCAAGGAGATTGATGGGGCTGTGATTTGGAGGTTTGATTCCAAAAAAGTTGAATGGCTCAAAGGGCCATCTATGATCAATCCAAGGTGTCTTTTTGCATCAGCCACATGTGGTACTATTGCTTTTGTTGCTGGGGGTCTTGATGCAAGAACTTACACCCAAGTGTTGGATTCTGCTGAGAAGTACAATTCTGAAAGCCAGTGTTGGGAGCCCCTCCCAAGGATGAACAAAAAGAGAAAGTTTTGCTCAGGCTGTTTCATGGACAATAAGTTTTATGTCCTTGGGGGGCAAGATGAGAATGGGAATGACCTTACGTGTGGGGAATTCTTTGATGGGAGAACAAGCACTTGGAACTTGATTCCTGGCATGTGGAGAGATATTCCTCTTTTTGTTTCACAATCTCCACCTCTACTTGCAGTTGTCAACAATGAGTTGTACACACTTGATGCTTCTTCCAATGAGCTGAAAGTGTATATGAAAGGAACCAACTCATGGAAGACTTTGGGAGTGGTTCCTGTTAGAGCTGATGCTCAAAGAGGTTGGGGTGTGGCTTTTAAATCTCTAGGTGATGAATTACTTGTCATTGGTGCACCTTCTGTGTCACACATAGTTGGTGCTTTGTCTATGTACACTTGCTGCCCTGATCCTTCTGATGACAACTTGAGGTGGAGGCAAATTGAATGTGGCAGCATTCAGCTCAATCACTTTATCCGCAATTGTGCTGTGATGATGGGGACC 1586 0.43 MTSKKPLPVPTFVSDFCFSYRSSQKMRVLELPPSDGNGSSTNEDEPRPQDADYSNVLSLSDELETSILARFPRSQQWKLCFLNKRFLALARSGEIYKIRRELGLKEPSVFMLASGESYWWGMEWPFKSSRKLPPIHSDYNFEYGDKESFCAGSHLLVSGKEIDGAVIWRFDSKKVEWLKGPSMINPRCLFASATCGTIAFVAGGLDARTYTQVLDSAEKYNSESQCWEPLPRMNKKRKFCSGCFMDNKFYVLGGQDENGNDLTCGEFFDGRTSTWNLIPGMWRDIPLFVSQSPPLLAVVNNELYTLDASSNELKVYMKGTNSWKTLGVVPVRADAQRGWGVAFKSLGDELLVIGAPSVSHIVGALSMYTCCPDPSDDNLRWRQIECGSIQLNHFIRNCAVMMGT 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00100 404 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 52 401 - -
Pste5g00100 404 SMART kelc_smart 154 197 IPR006652 GO:0005515
Pste5g00100 404 SMART kelc_smart 198 247 IPR006652 GO:0005515
Pste5g00100 404 MobiDBLite consensus disorder prediction 29 52 - -
Pste5g00100 404 Gene3D - 99 386 IPR015915 GO:0005515
Pste5g00100 404 Pfam Kelch motif 186 234 IPR006652 GO:0005515
Pste5g00100 404 Pfam Kelch motif 237 281 IPR006652 GO:0005515
Pste5g00100 404 FunFam F-box/kelch-repeat protein SKIP11 101 386 - -
Pste5g00100 404 SUPERFAMILY Kelch motif 149 359 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00100 Pste-Chr5 799424 801552 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00100 57 278 Miscellaneous Gene Families AT4G33900 28.070 7.31e-10 58.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00100 5 799424 801552 Pste5g00100 5 799424 801552 ECH