Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00092 GTGGGTGATTGGAGGAAGGAGGAGAAGAAAATGTTGGGGGGAAAGTTAGGAAAGCCAATGGGAAAAGAAGACGTGGGAGGCTGGAGTACTGGAGGAGGGGTTAAGGGAATTTGGTGTGGAGGGAATGTAGAGGTATACTCAGGTCGCGGGGAGAGGGGAATAGAGGGAGGCATCGTAGGAACAAGAAAAGGCTCTAACTCTAAATATTTGAAACGCAAACAGAAGAGAGATGTGAAGACGATAAAGACATGGCTAGTTGAAATAGAAGCACAATCCGGAGTATGCTATGGAAGAATTGGCAACAACTTGCCATCCCCACAAGAAGTTGTGGCGCTCTACAATCAATTCAACATCCGCAGGATGAGAATCTATGATCCAAATCCACAAGTCCTCCAAGCTCTCAGAGGTTCCAACATTCAACTGTTACTAGACATCCCAAGTGACAACCTCCCAAACCTTGCTGCTAGCCAAGACAATGCCAACAAATGGGTGCAAGACAACGTCAGAAACTACGGCAATGTTAGATTCAGATACATTTCAGTGGGGAATGAAGTAAATCCTACAGAATCATTTGCACAGTTTTTGGTGCCTGCCATGCAAAACATTCAAAGAGCCATTTCTACAGCTGGCCTTACAGCAATCAAAGTTACCACTGCTATTAAGACTGATGCCTTGACAACGGATTCTTTCCCACCATCAAAGGGCTCCTTTAGGTCTGATTATAGAGGAGCCTTTCTTGATGACATTAGTCTTGACTATGCTCTATTAAGATCTAATTCGGTGGTCGTTAACGATGGTTCACTCGGTTATACTAACCTCTTTCATGCTATCGTGGATGCCGTTTACTCTGCATTGGAGAAAGCTGGAGGAGGGTCAGTCAACATAGTTGTGTCAGAGAGTGGATGGCCTTCTTACGTGGGATTGCAACTTCACTTGATAATGCAAGAACTTATAACACAAACTTGCTTGAATTGTCAAGGAGGAACTCCCAAAAGGCACAGTAGACCCATTGAAACTTATTTGTTTGCCATGTTTGATGAAAATCAGAAGCAGCCTGACTATGAGAATCGGTGGGGCTTGTATGCTATATCTCCATTCTACACTTCAATATTTGAAGATGATGATCCTTGCAAAGAGTACCAAATTAACCTGAGACAGTCCCATTCAACTCACAAAACTTCTTCCATCACTTCAACAATCTTCTTGTTTACCCTTCTAATCATCAATACACCCACAACAGATGCACAATCTGGAGTATGTTATGGAAGAGTTGGCAACAACTTGCCATCCTCTAAAGAAGTTGTGGCGCTCTACAATCAATTCAACATCCGCAGGATGAGAATCTATGGTCCAAGCCAAGAAGTCTTTGAAGCTCTAAGCGGTTCCAACATTGAACTGTTGCTAGACATCCCAAATCACGACCTTTCAAACCTTGCTGCTAGCCAAGGCAATGCAAACAAATGGGTTCAAGACAACGTCAGAAACTTTGGCAATGTGAGATTCAGATACATTTCAGTGGGAAATGAAGTAAATCCTACAGACTCATTTGCACAGTTTTTGGTGCCTGCTATGCAAAACATTCAAACTGCCATTTCTGCAGCAAGCCTTGCAAACCAAATCAAAGTTACCACTGCCATCAAGACTAGTGCCTTGGCAGAATCTTTCCCACCATCGAAGGGCTCCTTTAGCTCTGATTATAGAGGAGCATTTCTTGATGGTGTCATCAAATTTCTAGTCAACAACAACTCCCCATTATTGGTTAACGTTTACACTTATTTCAGTTACATTAACAACCAAAAAGATATTAGTCTTGACTATGCTCTATTAAGATCTAATTCGGTGGTCGTCAACGATGGTTCGCTCGGTTATCGTAACCTCTTTCATGCTACTGTGGATGCCGTTTACTCTGCATTGGAGAAAGCTGGAGGAGGGTCAATCAACATAGTTGTGTCAGAGAGTGGATGGCCTTCTTCTGGTGGGACTGCAACTTCACTTGATAATGCAAGAACTCATAACACAAACTTGGTTCGAATTGTCAAGGAAGGAACTCCAAAAAGGCCTGGTAGACCCATTGAAACTTATTTGTTTGCCATGTTTGACGAAAATCAAAAGCAGCCTCAGTTTGAGAAGTTTTGGGGGCTCTTCCTTCCAAATAAACAACCCAAATACTCAATCAATTTAAATTAATTAGTAGAAGCATAATTAAGTGAGAAATAAATCAAATAATTATGCATGATTCCCAATGGAACTTTCATAATTGTCCTAAAAAAGGTAGGTGTACTATGGAGCTTCATCTGCATTCTTGGAGTGTATATGTACTCGTTTACGAGCAAATTAAGTTAGTTTTAAATAAAAGTTGTCTTATTAATATTTCAGTGTTTAATCGAT 2388 0.4133 VGDWRKEEKKMLGGKLGKPMGKEDVGGWSTGGGVKGIWCGGNVEVYSGRGERGIEGGIVGTRKGSNSKYLKRKQKRDVKTIKTWLVEIEAQSGVCYGRIGNNLPSPQEVVALYNQFNIRRMRIYDPNPQVLQALRGSNIQLLLDIPSDNLPNLAASQDNANKWVQDNVRNYGNVRFRYISVGNEVNPTESFAQFLVPAMQNIQRAISTAGLTAIKVTTAIKTDALTTDSFPPSKGSFRSDYRGAFLDDISLDYALLRSNSVVVNDGSLGYTNLFHAIVDAVYSALEKAGGGSVNIVVSESGWPSYVGLQLHLIMQELITQTCLNCQGGTPKRHSRPIETYLFAMFDENQKQPDYENRWGLYAISPFYTSIFEDDDPCKEYQINLRQSHSTHKTSSITSTIFLFTLLIINTPTTDAQSGVCYGRVGNNLPSSKEVVALYNQFNIRRMRIYGPSQEVFEALSGSNIELLLDIPNHDLSNLAASQGNANKWVQDNVRNFGNVRFRYISVGNEVNPTDSFAQFLVPAMQNIQTAISAASLANQIKVTTAIKTSALAESFPPSKGSFSSDYRGAFLDGVIKFLVNNNSPLLVNVYTYFSYINNQKDISLDYALLRSNSVVVNDGSLGYRNLFHATVDAVYSALEKAGGGSINIVVSESGWPSSGGTATSLDNARTHNTNLVRIVKEGTPKRPGRPIETYLFAMFDENQKQPQFEKFWGLFLPNKQPKYSINLN 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00092 728 FunFam glucan endo-1,3-beta-glucosidase, basic 417 727 - -
Pste5g00092 728 SUPERFAMILY (Trans)glycosidases 418 726 IPR017853 -
Pste5g00092 728 Pfam Glycosyl hydrolases family 17 418 726 IPR000490 GO:0004553|GO:0005975
Pste5g00092 728 Pfam Glycosyl hydrolases family 17 93 247 IPR000490 GO:0004553|GO:0005975
Pste5g00092 728 Pfam Glycosyl hydrolases family 17 248 362 IPR000490 GO:0004553|GO:0005975
Pste5g00092 728 SUPERFAMILY (Trans)glycosidases 93 362 IPR017853 -
Pste5g00092 728 Gene3D Glycosidases 91 246 - -
Pste5g00092 728 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 407 726 IPR044965 GO:0004553|GO:0005975
Pste5g00092 728 Gene3D Glycosidases 417 728 - -
Pste5g00092 728 Gene3D Glycosidases 247 368 - -
Pste5g00092 728 ProSitePatterns Glycosyl hydrolases family 17 signature. 646 659 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00092 Pste-Chr5 762694 777285 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00092 412 728 Glycoside Hydrolase AT3G57240 61.635 5.99e-133 395
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00092 5 762694 777285 Pste5g00092 5 762694 777285 ECH