Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00058 ATGGGATCAGAACCCGAATTAAAGCTTCCAATTATTGACTTCTCGAGTGTGGACTTAGAGTCCAATGTTGCAGAGTGGGAATCAGTGAAATCCCAAGTTCACATAGCACTTGAAGAGTATGGTTGCTTTGAGGCTGTGTTTGATAAAGTCCCTTTGGACCTTCGAAAAGCCATGTTTCTTGAAGTGGAAGAGTTATTCAATCTCCCTCTTCTAACCAAGCAACGAGTTGTGTCTAGTAGGCCATACCATGGTTATGTTGGCCCTCTTCAACTCTATGAGAGCATGGGAATTGAGGATGTAGATTTCCATGACCAAGTCGAAAGTTTAATCAATATCTTATGGCCACAAGGAAAACCAAGTTTTAGCAAAAACCTGCAATATTTCACAGAGCAAGTGACGAGGTTGGATAAGATGATTAGAAAGATGATTTTGGAGAGCTTAGGTGTTGAAAAATATTTGGATGAGCACATGAACTCAACAAATTACCTTGCACGGCTAATCAAGTACGAAGGGCCTCAAACTAATGAAGCAAAAGTTGGCATAGCAGAGCACACAGATAAGAATATATTCACCACATTGTGCCAAAATCAAGTTGATGGTTTAGAGGTGCAGACCAAGAGAGGAGAGTGGATCAAATGCAAGCCCTCAACACCAAATAGTTTCGTTGTTGTTACTGGGGACACACTTTATGCATGGACAAATGGGAGGGTGCATACACCTGTTCACCGAGTAATGGTGAGTGGAAATGAGGCAAGGTTCACTATTGGACTGTTCACGGTTCCAAAACCAGGATTCATAATAAAAGCCCCAGAGGAGCTTGTGACAGAGGACCACCCTTTGCTTTTTAAGCCCTTTGTCCAGAGTGAGTTCATGAAGTTTGTTCGCTCTTCCGAGGCTATCAAAAATGCTCTCAAGGTTTATTGTGGAGTCTGAGACTTTATTCATGATTGCACTAGTGCTCCCTCTACAGAATCCTTTTGGATTTTCATACTCTAATATTTGCATCAAGCGGTGTGTATACGTATGAATAGTATGAATCTCTCTTCCCCAATGCATATGGACACAGATTGTGTGCATTTTGTATTATCC 1089 0.4151 MGSEPELKLPIIDFSSVDLESNVAEWESVKSQVHIALEEYGCFEAVFDKVPLDLRKAMFLEVEELFNLPLLTKQRVVSSRPYHGYVGPLQLYESMGIEDVDFHDQVESLINILWPQGKPSFSKNLQYFTEQVTRLDKMIRKMILESLGVEKYLDEHMNSTNYLARLIKYEGPQTNEAKVGIAEHTDKNIFTTLCQNQVDGLEVQTKRGEWIKCKPSTPNSFVVVTGDTLYAWTNGRVHTPVHRVMVSGNEARFTIGLFTVPKPGFIIKAPEELVTEDHPLLFKPFVQSEFMKFVRSSEAIKNALKVYCGV 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00058 310 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 2 299 - -
Pste5g00058 310 SUPERFAMILY Clavaminate synthase-like 6 295 - -
Pste5g00058 310 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 160 261 IPR005123 -
Pste5g00058 310 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 292 - -
Pste5g00058 310 Pfam 2OG-Fe(II) oxygenase superfamily 156 259 IPR044861 -
Pste5g00058 310 Gene3D - 2 298 IPR027443 -
Pste5g00058 310 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 90 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00058 Pste-Chr5 516135 517972 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00058 6 290 Glycosyltransferase AT5G59530 22.333 1.35e-14 71.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g03210 4 23850093 23859987 Pste5g00058 5 516135 517972 PCT