Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00047 TGGAAGAGGAATTCATCACTAACAAGAAAGTGAAAGAGAATAAGAATAAGGGAGTAGATGTTGGATTCGTGGTGCCTCCAGAGTTGATAACGTCTTCCCTCGTTCCCTCTCTGTGTGTGGTGAGTTTCTGAAATTCTTATGTGAGAGAAGGTTGGGGTGGGGTGCTGCAGGCTGCGCGGCGCACGGCGGCATGCAGACAGGGCGGCGGGCGGAGGGGGAGGCAGAAAAGGAGGAAGATGATAGTGGTTTTGGAAAATCAACTCTGAGCGTCAAATGTTTTGTGGCGAAACTAATAAGCAAGTTCCAAACATTCAAGTTGCATCACAACAAGAAGCCAAAACCATATGTGTCTGATTGTGTCACCTTTTGCCTTATCATGTACCCCAGTTTTCTAACGAACAATTCATGTGGATATGGTTCACCAATCATTCAGGCATCTGTTTGGTGTATCCACGTCATCATTTTCGTGACTGGGCTCCGCGTCACCCATGGGACATTATTTACTTTTGATCCAGTGAGAATGGATCATATTAGTAATGAGGCTAGTGTTGACCGCTTTCCGATTGGTCCTTCAGATATTCTTGGTAGGACAATTGCTTTCAGGGTTCTTTTTTGTAAGTCCATGTCACATTTTAGGCACCAGATATTTCTTGTGTTGTTTGATTTCTTCTATAGGTTTAGGGGTTTTTTGGCATCCTTTATATCATGGTTGCATCCCAGAAACCCCCAGGGGATATTGGCAATGATGACAATTGTTGCTTTCTTGTTGAAACGATACACAAATGTGAAAGTAAGGGCTGAAATGGCATATAGGAGGAAGTTTTGGAGAAACATGATGAGAACTGCTTTGACCTATGAGGAGTGGGCTCATGCAGCTAAGATGCTTGATAAAGAGACAACAAAGATGAATGAATCAGACCTTTATGATGTAGAATTGGTGAGGAATAAGCTTCAAGAACTTCGCCACCGTAGGCAAGAGGGATCTCTTAGAGATATAATATTCTGTATGCGTGCGGATCTTGTTAGAAATTTAGGCAATATGTGTAATCCTGAACTACACAAGGGTAGGCTTCAGGTGCCCAAATTAATCAAGGAGTATATTGATGAGGTAACGACTCAATTGAGAATGGTCTGTGATTCTGATTCAGAGGAGCTATCACTGGAAGAAAAGCTTGCTTTCATGCATGAAACTAGGCATGCATTTGGGAGGACAGCTTTGCTATTAAGTGGGGGCGCTTCTCTTGGAGCTTCTCACGTGGGTGTAGTTAAAACACTGGTAGAACATAAACTCTTGCCTAGGATAATTGCTGGTTCAAGTGTGGGATCCATTATGTGTGCTGTTGTTGCCACCAGGACTTGGCCTGAGCTTCAGAGCTTTTTTGAGGATTCATGGCACTCATTGCAATTTTTTGATCAAATGGGTGGGATTTTTACAGTTGTTAAGAGAGTTACAACATTTGGTGCCGTTCATGAGATCAGACAGTTGCAGATGATGTTGAGGCATCTAACAAGCAACCTTACATTTCAAGAAGCTTATGACATGACAGGTAGAATTCTTGGGATTACAGTTTGTTCCCCAAGGAAGCATGAACCACCTAGATGTCTTAACTACTTAACTTCACCTCACGTGGTTATATGGAGTGCAGTCACTGCTTCTTGTGCCTTTCCTGGCCTTTTTGAGGCTCAAGAATTAATGGCAAAGGATAGAAGTGGAGAGATTGTTCCTTACCATCCTCCCTTTAACTTAGGTCCCGAAGAGGGATCCGCACCAGCACGCCGTTGGAGGGATGGTAGCTTGGAGATTGATTTACCTATGATTCAGTTGAAAGAACTATTCAACGTCAATCATTTTATAGTTAGTCAGGCCAACCCTCATATTGCACCGTTATTGAGATTGAAAGCATTTGTGCGGACGTACGGGGGCAACTTTGCTGCCAAGCTTGCTCATCTTGTGGAGATGGAGGTGAAACATAGGTGTAATCAAATATTGGAACTTGGTTTTCCATTAGGTGGACTTGCTAAGTTGTTTGCTCAAGACTGGGAAGGTGATGTGACTGTTGTTATGCCCGCAACCCTTGCTCAGTACACCAAAATTATACAGAACCCTTCTTATGGAGAGCTTCAAAAGGCAGCCAACCAAGGGAGAAGATGTACATGGGAGAAACTTTCGGCCATAAAAGCAAACTGTGGTATTGAGCTTGCACTTGATGAGTGTGTTGTGATTCTCAACCATATGAGAAGACTAAAAAGAATTGCTGAGAGAGCCGCTTCTGCTTCTCATGGTTTGTCCAGCACTGTCAGGTTCAGTGCTTCAAAAAGGATTCCTTCATGGAATTGCATTGCACGAGAGAATTCAACAGGCTCCCTTGAGGACCTTACTGATGCTACCTCATTGCATCAAGGCATTAGCAGTTCCAACGGAGCCAATGGTAAAACTTGGAAGACCCACCGTGGCATGCACAAAGGAAGTGACAGTGACTCTGAAAATGTTGATTTGAATTCTTGGACAAGATCTGGTGGGCCTTTGATGAGGACTACTTCAGCAAATATGTTCATTGATTTTCTCCAAAACCTAGAAGTTGATACTGAACTGAATAAAGGCTCGGTGAGTCATGCTATCCCTAATGATTTTCAGTATCGTAGCCCCAGGCTCATAGCACTGGATAGGAACTCTAACACCACAGAATCTGAGCAAAGGGAAATTAGCAACAGGGTGGTCAATGGGTCCAGCATACTGGTGACTGAAGGTGATCTTTTGCAGCCTGAAAGGATCCATAATGGGATTGTGTTTAATGTTGTCAAGAAAGAAGACTTGACACCTTTAAATAGGAGTCATGATCTTGAAAATTACCACAATGAAGTTGCTGAATGTGTCCAAGATGAATGTCCAGGGAAGGAGATTGATGATGCTAGCTCGGCTTCTGAATATGAAGATGATGAATACGCACGATCTGGCTCTTTAACTGCAACTCCAGATTACAATTTCATGGATCATCATTCTGGTGCAGACTCGGGTATGGATCACAGCGTTGTTGACAGTTAGTTCCAAGTATCAATTCTTTTCCAGTGACTTCTTAATATTTTGTTCCTATTCCCCTCCCCATTGTAAATAGAATGAAATCTAGTTTTGGAGGGTCTCTCTAATCATGATTTTAATTGGAATAGTCCCCCATTTGGTTACTCATATAGATGTATAAAAAGAAAAATATGTTTTGTAGAAACATTCCACCACCATATTCATATGCTAGGTTACTCATATAGATGTATAAAAAGAAAAATATGTTTTGTACAAACATTCCACCACCATATTCATATGCTAGGTTACTACTTCTCAGATTTTTGAA 3344 0.4214 MQTGRRAEGEAEKEEDDSGFGKSTLSVKCFVAKLISKFQTFKLHHNKKPKPYVSDCVTFCLIMYPSFLTNNSCGYGSPIIQASVWCIHVIIFVTGLRVTHGTLFTFDPVRMDHISNEASVDRFPIGPSDILGRTIAFRVLFCKSMSHFRHQIFLVLFDFFYRFRGFLASFISWLHPRNPQGILAMMTIVAFLLKRYTNVKVRAEMAYRRKFWRNMMRTALTYEEWAHAAKMLDKETTKMNESDLYDVELVRNKLQELRHRRQEGSLRDIIFCMRADLVRNLGNMCNPELHKGRLQVPKLIKEYIDEVTTQLRMVCDSDSEELSLEEKLAFMHETRHAFGRTALLLSGGASLGASHVGVVKTLVEHKLLPRIIAGSSVGSIMCAVVATRTWPELQSFFEDSWHSLQFFDQMGGIFTVVKRVTTFGAVHEIRQLQMMLRHLTSNLTFQEAYDMTGRILGITVCSPRKHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKDRSGEIVPYHPPFNLGPEEGSAPARRWRDGSLEIDLPMIQLKELFNVNHFIVSQANPHIAPLLRLKAFVRTYGGNFAAKLAHLVEMEVKHRCNQILELGFPLGGLAKLFAQDWEGDVTVVMPATLAQYTKIIQNPSYGELQKAANQGRRCTWEKLSAIKANCGIELALDECVVILNHMRRLKRIAERAASASHGLSSTVRFSASKRIPSWNCIARENSTGSLEDLTDATSLHQGISSSNGANGKTWKTHRGMHKGSDSDSENVDLNSWTRSGGPLMRTTSANMFIDFLQNLEVDTELNKGSVSHAIPNDFQYRSPRLIALDRNSNTTESEQREISNRVVNGSSILVTEGDLLQPERIHNGIVFNVVKKEDLTPLNRSHDLENYHNEVAECVQDECPGKEIDDASSASEYEDDEYARSGSLTATPDYNFMDHHSGADSGMDHSVVDS 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00047 950 MobiDBLite consensus disorder prediction 1 21 - -
Pste5g00047 950 MobiDBLite consensus disorder prediction 898 950 - -
Pste5g00047 950 MobiDBLite consensus disorder prediction 898 919 - -
Pste5g00047 950 MobiDBLite consensus disorder prediction 737 769 - -
Pste5g00047 950 Pfam Domain of unknown function (DUF3336) 205 336 IPR021771 GO:0004806|GO:0006629
Pste5g00047 950 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 158 681 - -
Pste5g00047 950 CDD Pat_SDP1-like 273 680 - -
Pste5g00047 950 Pfam Patatin-like phospholipase 343 521 IPR002641 GO:0006629
Pste5g00047 950 SUPERFAMILY FabD/lysophospholipase-like 339 685 IPR016035 -
Pste5g00047 950 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 343 546 IPR002641 GO:0006629
Pste5g00047 950 Gene3D Cytosolic phospholipase A2 catalytic domain 418 602 - -
Pste5g00047 950 Gene3D Cytosolic phospholipase A2 catalytic domain 339 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00047 Pste-Chr5 452469 457672 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00047 114 908 Acyl Lipid Metabolism Gene Families AT5G04040 74.691 0.0 1224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00047 5 452469 457672 Pste5g00047 5 452469 457672 ECH
Pste5g00047 5 452469 457672 Pste4g03218 4 23889283 23893521 PCT