Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00044 ATGAAGCTCATTAGCATCAACCCCAGAAACCTCAAACTCAGCCCCAAACACCTCTTCCGCTCCAGAAAGCATCGATCTTCACTCTCCCGATCCGACCCCCCCTCCTTCGGATCCGGATCCTCATCCGACGACTCATCCACCCACAAACCCGCCGCCGGCAACCGCACCCCCACCAGTGTCCTCCCCGACGACTGGTCCGACCTCAACGTCGACGTCCGGTCGGACACGGACCTCGCCCAGGCCTTCCGCCTCATCGACCGCGACAACGACGGCGTCGTCTCCCGTCAGGACCTCGAAACCCTCCTCACCCGCCTCGGCGCCTCCGACGTCCCCCTCATGCTCAGCGAGGTCGACTCCGACGGCCTCGGCTGCATCACCGTCCAAGCCCTCATCAACCACATCGGCTCCCACTCCGACTCCCACCCCGACGAGCTCCGAGAGGCCTTCCAGGTCTTCGACACCGATCGCGACGGCCGGATCTCCGCCGAGGAGCTTCTTAGGGTTTTCCAAGCCATCGGAGACGAGCGCTGCACTTTAGACGAGTGCCGCCGCATGATACAAGGTGTCGACCGCACCGGTGACGGCTTCGTCTGCTTCGAGGACTTCTCCCGTATGATGGACCTGCAGCACCAGCACCAGCACCAGCACCAGCACCAGCACCGGTGA 666 0.6366 MKLISINPRNLKLSPKHLFRSRKHRSSLSRSDPPSFGSGSSSDDSSTHKPAAGNRTPTSVLPDDWSDLNVDVRSDTDLAQAFRLIDRDNDGVVSRQDLETLLTRLGASDVPLMLSEVDSDGLGCITVQALINHIGSHSDSHPDELREAFQVFDTDRDGRISAEELLRVFQAIGDERCTLDECRRMIQGVDRTGDGFVCFEDFSRMMDLQHQHQHQHQHQHR 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00044 221 ProSitePatterns EF-hand calcium-binding domain. 86 98 IPR018247 -
Pste5g00044 221 SUPERFAMILY EF-hand 75 207 IPR011992 -
Pste5g00044 221 Pfam EF-hand domain 78 106 IPR002048 GO:0005509
Pste5g00044 221 ProSiteProfiles EF-hand calcium-binding domain profile. 140 175 IPR002048 GO:0005509
Pste5g00044 221 SMART efh_1 77 105 IPR002048 GO:0005509
Pste5g00044 221 SMART efh_1 181 209 IPR002048 GO:0005509
Pste5g00044 221 SMART efh_1 144 172 IPR002048 GO:0005509
Pste5g00044 221 SMART efh_1 109 137 IPR002048 GO:0005509
Pste5g00044 221 Pfam EF-hand domain pair 144 206 IPR002048 GO:0005509
Pste5g00044 221 ProSitePatterns EF-hand calcium-binding domain. 153 165 IPR018247 -
Pste5g00044 221 ProSiteProfiles EF-hand calcium-binding domain profile. 73 108 IPR002048 GO:0005509
Pste5g00044 221 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 144 207 - -
Pste5g00044 221 MobiDBLite consensus disorder prediction 15 66 - -
Pste5g00044 221 MobiDBLite consensus disorder prediction 30 63 - -
Pste5g00044 221 FunFam Probable calcium-binding protein CML35 129 215 - -
Pste5g00044 221 CDD EFh 144 206 IPR002048 GO:0005509
Pste5g00044 221 Gene3D - 72 129 - -
Pste5g00044 221 Gene3D - 130 221 - -
Pste5g00044 221 ProSiteProfiles EF-hand calcium-binding domain profile. 177 212 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00044 Pste-Chr5 412604 413269 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00044 12 210 EF-hand Containing Proteins AT3G10190 49.528 4.07e-54 171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00044 5 412604 413269 Pste5g00044 5 412604 413269 ECH