Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00009 AAGCTTTCGTCTCTACTCTATATTACATGTTCTTGTTAGTATTGCTATTAGGCACATTTTGACTAGAAATAGAAACATCGCTTCGTGTCAACCCGTGTGACGGGTGAGGCTCTCATATCCCTCCCTACTAAGGTCAAGTCCCAGGGTTGCTACTTCATGGAGACGACGCTTTTTCTAGCCATTTTTCTTCTCCTATTAGACCCTTTTAATGTTGTGAGTGCAAACTTTGAAGGAGATGCTCTGTTCGCATTCAGAAGAGCCGTGAAAGACCCAAATAACGTTCTACAAAGCTGGGATCCAACTTTGGTGGATCCTTGTACATGGTTCCATGTTACCTGTGATGATGATAAGCGAGTTACCCGACTAGACCTTGGACATGCAAAACTGTCTGGCTATTTGGTTCCAGAGCTAGGAAGGCTACAGCGCCTTCAGTTTCTAGAACTGTACAAGAATGATTTAATGGGTCCGATACCAAAGGAACTGGGAGACCTCAAGAACCTGGTTAGCTTGGGTCTCTACCAGAACAACCTCACTGGCTCCATCCCCGCCACCTTCTCCAACCTCTCCAACATCAAATTCTTGAGACTCAACAGCAACAAGCTCACCGGAAGAATACCGAGAGAACTCACTAAGTTGAGAAACCTCAAGATCTTAGACCTATCAAATAATGATCTATGTGGTACTTTCCCGACATCCGGCTCCTTTTCCAAGTTCGCCGAAGAAAGTTTCAAGAATAATCCAAGACTTGAAGGACCAGAATTGATGGGGTTCGTCAGATATGATACTGGAGAAAGCTGCAAATGAACGATTATATCTACCAAAAAACGACTGGGGGGAACCCCATCCTCGTGTAAACAGCATGTCATAGGAAATGTCTGTTTTCCCTTGCATCCGTTTCTAAATTACTTATTTGTACCAAATTACCAGTACTATATATTGCATTCGAATTAGGACCTCAGCAATCCTTTTCTTGGTTTCCAGATTTGTAAAGCTGGTACGGATGGTTTGGTATGTCTATTTGTAATATATAGATAGATATAGCTTAATGATAACAATAGAA 1060 0.4226 METTLFLAIFLLLLDPFNVVSANFEGDALFAFRRAVKDPNNVLQSWDPTLVDPCTWFHVTCDDDKRVTRLDLGHAKLSGYLVPELGRLQRLQFLELYKNDLMGPIPKELGDLKNLVSLGLYQNNLTGSIPATFSNLSNIKFLRLNSNKLTGRIPRELTKLRNLKILDLSNNDLCGTFPTSGSFSKFAEESFKNNPRLEGPELMGFVRYDTGESCK 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00009 215 Gene3D Ribonuclease Inhibitor 22 204 IPR032675 -
Pste5g00009 215 SUPERFAMILY L domain-like 25 185 - -
Pste5g00009 215 FunFam Somatic embryogenesis receptor kinase 1 21 207 - -
Pste5g00009 215 Pfam Leucine rich repeat 114 173 IPR001611 GO:0005515
Pste5g00009 215 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Pste5g00009 215 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00009 Pste-Chr5 101101 102970 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00009 5 200 Receptor kinase-like Gene Family AT1G71830 57.653 1.20e-71 227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00009 5 101101 102970 Pste5g00009 5 101101 102970 ECH