Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03215 ATGGGTTGTGAGGGCAATGATAACCCTAAGCTTCCTGTTCTAGATTTCAGCATAGAAAATATGAAGCCAGGGACCAATTCCTGGTTTTCAACATGCAAAAGAGTGCGCCAAGCATTTGAAGAGTATGGTTGCTTTGTGGCTATGTATGATAAGGGTGGTGATGAGGTGCTACAAAAGGGTGTGTTTGGTTCCATCAAGGAACTGTTTGATCTTCCAACACAAACCAAACAAAGAAACATATATGAGGGCATGCCCTTGAAAAGCTATGTTGGACAGCACCCCAAAATTCCTCTCCATGAAAGCATGGGGATAGATGAGGGCACAACTCTAGAGGGAATTCAGAGTTTTGCTAAAAAAATATGGCCTATGGGGAATGATCAATTCTGCTATGGTCTATTGGAGCACTATGAAGCATATCAAGGGTCTACAAAATATCTGCTTAGACTTTTGGCACACAAAGCACCAGAACAGGTGGAGCCTCAGCTAGGTTTTGTGGCTCACACTGACAAGAGCTTCACCACAATTCTTCACCAAAATCATGTCAATGGTCTCATGGTGGAGACAAAGAATGGTAAATGGATTGATGTTGATTTCTCTTCACCCACTTCCTTTGTTGTCATGGCTGGTGATGCACTCATGGCATGGAGCAACGACAGAATACAGTCCCCAAATCACAAGGTTTTGATGAATGGGAATGAAACAAGGTACTCTCTTGGTCTTTTTGCCTTTCACAAAGGAATTGTCAAAGTTCCTCAAGAGCTAATTGATGAAGAACACCCTTTACAATATAAGCCATTTGATCATCTTGCATTACTCAACTTCACTTACAGTGCTAATATGAAAGCCTATTGTGGTGTGTGA 861 0.4181 MGCEGNDNPKLPVLDFSIENMKPGTNSWFSTCKRVRQAFEEYGCFVAMYDKGGDEVLQKGVFGSIKELFDLPTQTKQRNIYEGMPLKSYVGQHPKIPLHESMGIDEGTTLEGIQSFAKKIWPMGNDQFCYGLLEHYEAYQGSTKYLLRLLAHKAPEQVEPQLGFVAHTDKSFTTILHQNHVNGLMVETKNGKWIDVDFSSPTSFVVMAGDALMAWSNDRIQSPNHKVLMNGNETRYSLGLFAFHKGIVKVPQELIDEEHPLQYKPFDHLALLNFTYSANMKAYCGV 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03215 286 Pfam non-haem dioxygenase in morphine synthesis N-terminal 11 81 IPR026992 -
Pste4g03215 286 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 144 245 IPR005123 -
Pste4g03215 286 Gene3D - 129 273 IPR027443 -
Pste4g03215 286 SUPERFAMILY Clavaminate synthase-like 8 280 - -
Pste4g03215 286 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 11 269 - -
Pste4g03215 286 Pfam 2OG-Fe(II) oxygenase superfamily 150 243 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03215 Pste-Chr4 23872540 23875815 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03215 108 264 Glycosyltransferase AT5G59530 30.588 3.23e-11 61.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g03215 4 23872540 23875815 Pste5g00057 5 509376 510616 PCT